Input parameters:

  Query = T24C12.3 (Len=651)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (T24C12.3, Len=651):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MCSRFFGQKRSFSKFLQISPQVKEALASGEGVVALESTVITHGLPYPHNLSTARSLEQKVRSSGSHPATIALFDGKIHVG 80  
WD40-rpts                                 (__________________________________________________WD

Query       81 LDDEKLELLASSQNAVKVSSRDIAKTLIKKEVGGTTVASTMKIAHAAGISVFATGGIGGVHRGADQTFDVSADLQELSQT 160 
WD40-rpts       1__________________________________________________)                           

Query      161 PVCVVCSGVKSILDIPKTVEYLETHSVNCIVYGQENVFPSFFTRTSDRKAQFCTESLEEVVHLLKTSKSLGLPYGTILAC 240 
WD40-rpts                                                                                      

Query      241 PIPEKYAADGDAIQKAIDQAVQEAIEQNIASQSVTPFILARVNELTQGASMATNIALLENNASIAGRLAAKLCDRRPLTI 320 
WD40-rpts                                                                                      

Query      321 SQSQPTASTTRKPKVVSIGATIVDFEAITSEDVKDDGGSYNGQVVQRMGGVARNHADALARLGCDSVFISAIGDDNNGHF 400 
WD40-rpts                                                                                      

Query      401 FRQNSHKIDINRVKIISNKPTCTYLAVNVKGNVKYGIVTCEPLLSVITPSLVESNEDALESSDFILLDSNLSVPVMARVL 480 
WD40-rpts                                                                                      

Query      481 EIAKKHDKQVWLEPTDIDKVKKVFDTGLVGAVTAASPNANEFLKWAKLCHVSVDPSVIDTADGVLELIEKEKTKLLLNTS 560 
WD40-rpts                                                                                      

Query      561 IFIVTLANKGSAVVYRNKLGQLEFQSLPPPLQMNKVVSVSGAGDSFNSGVIAGLAHNKTVVESLQIGQECARLTLQTSLA 640 
WD40-rpts                                                                                      

Query      641 ISDAITPNLLA 651 
WD40-rpts                 

1 WD40-repeats found in QUERY=T24C12.3 (Len=651):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    28-133      3.55  261.31  0.01858       30.0%     26.95

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   28-133    SGEGVVALESTVITHGLPYPHNLSTARSLEQKVRSSGSHPATIALFDGKIHVGLDDEKLELLASSQNAVKVSSRDIAKTLIKKEVGGTTVASTMKIAHAAGISVFA

   WD40 Template    TGECLRTLS----------GHT--------------SGVTSVSFSPDGKRLVSGS------------------ED----------G--------------TIKVWD