Input parameters:

  Query = T23B5.1b (Len=347)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (T23B5.1b, Len=347):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MHSVDFSSIANLKDSLANSNSFKIRPAKDGVAHGFSVHFTSDLTGHGDNIIDSSKSRAWDLGIIPFKEPCLVKCDKEYEG 80  
WD40-rpts                                                                               (______

Query       81 SWKLLNNRLDVYNDFYDENLQKHEDSLRYETASLDQLQKIRDDSYFKAMMGEIDPIELPFTRDISSSIPAQCVLNTVESQ 160 
WD40-rpts      _______________________WD 1_____________________________)                       

Query      161 TPIRHLITNFCRYDGTLDQETFFRIEEFVGFRDHVQKIVPTKFRILGHLFYSDRVHFDARPDPSAHCQVDLSTVRSFNLR 240 
WD40-rpts                                                                                      

Query      241 EMRDIRLTQREDIVMASKEFVLYDFNISAEKFRQDTYITVTQDVTVQPTRPIADGVIYEFEILGIRNTKLRPVAAFLFPE 320 
WD40-rpts                                                                                      

Query      321 RVNTNPDMTVVFDLHLGEMLISLKDLP 347 
WD40-rpts                                 

1 WD40-repeats found in QUERY=T23B5.1b (Len=347):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    74-137      2.85  232.24  0.04520       17.5%     11.98

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   74-137    CDKEYEGSWKLLNNRLDVYNDFYDENLQKHEDSLRYETASLDQLQKIRDDSYFKAMMGEIDPIE

   WD40 Template    TGECLRTLSGHTSGVTSVSF---------SPDGKRLVSGS-------ED--------GTIKVWD