Input parameters:

  Query = T23B12.6 (Len=670)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (T23B12.6, Len=670):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAHQPCSSSSFSNDSGSDYIVNLNVGGRIFATSCNTLTWIPDSFFTSLLSGRMNSVKDPSGAIFIDRDPDLFRVILNYLR 80  
WD40-rpts                                                                                      

Query       81 TKQVDLCGIKVDTLKHEALFFGLTPLIRRLTLCEELSSTSCGSVYFCGMIPPPDMPLENLPNEKSRSPMYSNSSETSTNN 160 
WD40-rpts                                                                                      

Query      161 SKNKSNGSPRHRGHSKKQSTDMSRYIKNELSELAKSKSQPDRDTDPMKVRMIRAHICSIVVAYSYFVCVYRVTEWNTYVL 240 
WD40-rpts                                                                                      

Query      241 LWKSPRARTYVSHIAVNTKIAATVAERLVAVSFQDDTIGLWHIDDEGKTEKKGLFSMNVSIDNLFFVGTQMVALSKSGKV 320 
WD40-rpts                                                 (__________________WD 1______________

Query      321 GIWHSATQNWQAQDVQPISCYDTAGSSLILGCANGSMNHIDMQKFPLRMKDNDLLVTELFRDPNGETITSLSVFLTPKTS 400 
WD40-rpts      ___)                                                                            

Query      401 ACGNWIEIAYGTSNGVVNLILQHPETAGHQPVLFQSYNIHNSPVQRVSLNTSHLISVCSEYNHVRSWNVTRFRGMINTQP 480 
WD40-rpts                                                                                      

Query      481 GTVPLASFKVLTLDSIDETTDRQYNHPGPYGDQDSEQVLIQRLIPNAQKLFVRLASTGERICTVDSVEDSPITAFCVHEL 560 
WD40-rpts                                                                                      

Query      561 DGQKLGSRLRKYLFCGNGNGSVQVWDLTSALDQFHLKNGSHPQQQQVNPPAAANQSELIKPQLAQSPRSLINLSNYSGGP 640 
WD40-rpts                                                                                      

Query      641 TPQELLDVIDDNDICCSTPSLSRCPSAAFQ 670 
WD40-rpts                                    

1 WD40-repeats found in QUERY=T23B12.6 (Len=670):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 10   284-324      3.59  263.00  0.01765       20.0%     25.69

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  284-324    DDEGKTEKKGLFSMNVSIDNLFFVGTQMVALSKSGKVGIWH

   WD40 Template    TGECLRTLSG-HTSGVTSVSFSPDGKRLVSGSEDGTIKVWD