Input parameters:

  Query = T21E12.2 (Len=380)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (T21E12.2, Len=380):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGSRLSCSCSQAECWTNDESTLRIDAELFELSQDGQKWDKLDGRLANVRVFNAFDDSSPRLLATSSSGQVLLDTLIPMGE 80  
WD40-rpts                                                                                      

Query       81 KVHKVSDFFVYLKTEGRTIGFNTLSSRDTSLLISQATNTTAFNMFQHSFSVSVSRIATFEGDSIQPCDEQPETSNVSLNP 160 
WD40-rpts                            (____________________WD 1____________________)            

Query      161 LNMVFNYKGSPVEIDLLECFACSSEAENCVDIAHANNIFRVIVSAHAHLFLIQALNVSSLLLARTTSNLVAINYLARQND 240 
WD40-rpts                                                                                      

Query      241 KIQQKLIALLETSESSENASKEDIRQMLLLKNVVVTQRLNSLQQRALPGIENVKNIYPLPQHLLKKRSIPIESVHNKIEK 320 
WD40-rpts                                                                                      

Query      321 NLATTTTTFLLHSMLLLFLYHFFFLLALLLQTNIRTHLPFSLHFLHSIPPLGVFFSVIHL 380 
WD40-rpts                                                                  

1 WD40-repeats found in QUERY=T21E12.2 (Len=380):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   103-148      3.04  240.30  0.03538       22.5%      0.07

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  103-148    TLSSRDTSLLISQATNTTAFNMFQHSFSVSVSRIATFEGDS-IQPCD

   WD40 Template    TGECLRTLSGHTSGVTSV-------SFSPDGKRLVSGSEDGTIKVWD