Input parameters:

  Query = T14G8.1 (Len=1787)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (T14G8.1, Len=1787):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSDDQHESIDGDETMEEDSMLAEGHEDGEEDVGEDEEEVETEESQGVPTTSEKKKPPPKKKKGGKKSSKKKNNCDYPDPY 80  
WD40-rpts                                                                                      

Query       81 KSTSAEISAAIGLTDVDVDYEQEEFQSITNLKNFSSLVKPYILKVNPGTNVTKMYPLFQVKYKEFQDHMTAHGKSIQKQQ 160 
WD40-rpts                                                                                      

Query      161 RAKFVPVPVPVTPQEKIIPQKTRSSARRKRRDGSDGEGGGHDSDQEFEALIKQHEKQQDEAEKGKEEARINRAAAKVDKR 240 
WD40-rpts                                                                                      

Query      241 KAALESARASKRARKEQGVVEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEEHGPDVLIVE 320 
WD40-rpts                                                                                      

Query      321 EEPAKANMDYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCIIPEPAQRIEKILSWRWKEISYPEPLEC 400 
WD40-rpts                                                                                      

Query      401 KEGEEASKDDVFLKPPRKMEPRREREFFVKWKYLAYWQCEWLSETLMDVYFTALVRMYWRKVDSENPPIFEESTLSRHHS 480 
WD40-rpts                                                                                      

Query      481 DHDPYKLRERFYQYGVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWERDDTDIANYEDAIIKYWHHRERMLND 560 
WD40-rpts                                                                                      

Query      561 EVPRNVQKMIAKQREAKGLGPKEDEVTSRRKKREKIDILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILA 640 
WD40-rpts                                                                                      

Query      641 DEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRG 720 
WD40-rpts                                                                                      

Query      721 GPKVSKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTPLQNNLE 800 
WD40-rpts                                                                                      

Query      801 ELFHLLNFLAPDRFNQLESFTAEFSEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNIL 880 
WD40-rpts                                                                                      

Query      881 TRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVL 960 
WD40-rpts                                                                                      

Query      961 IFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNP 1040
WD40-rpts                        (__________________________WD 1_________________________)     

Query     1041 HNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAGLGAKDGKSMSKTELDDVLRWGTEELFKE 1120
WD40-rpts                                                                                      

Query     1121 EEAPVEGADGEGTSSKKPNEQEIVWDDAAVDFLLDRNKEEEGQDGEKKEHWTNEYLSSFKVATYNTKEADDADDDEDETE 1200
WD40-rpts                                                                                      

Query     1201 VIKEGTEEQDPNYWEKLLKHHYEQDQETELQKLGKGKRVRRQVNYASENMGQDWSAQNNQQQEEDDGSEYGSDNGELLQT 1280
WD40-rpts                                                                                      

Query     1281 DEDYEERRRRREERSEKLPPLLAKVNGQIEVLGFNPRQRKAFYNAVMRWGMPPQDLTQSSWQVRDLRNKSEKVFKAYSSL 1360
WD40-rpts                                                                                      

Query     1361 FMRHLCEPVVDNSDSFMDGVPREGLNRQAVLSRIGLMSILRKKVQEFEKFNGEWSMPETREKMLATAAQASVSNLPGMIK 1440
WD40-rpts                                                                                      

Query     1441 IKEEPIDIDETPMDVDQSNITKTEELASEVKVEEEPKAPRLPYKFNICDGGYTELHSLWINEEKVARNGKEYEIWHRRHD 1520
WD40-rpts                                                                                      

Query     1521 FWLLAAVAVYGYGRYQINFQDIMNDPKFSIVNEPFKQTGADPATNFADVKNKFLARRFKLLEQSLVIEEQLRRAAHINKQ 1600
WD40-rpts                                                                                      

Query     1601 QSPDQVGQLAQHFSELEHTADAHVNIARESNNGNRNANAILHKCLAQLDDLLSDLKTDVARLPATISQVRPVTERLQMSE 1680
WD40-rpts                                                                                      

Query     1681 RQILSRLVVAKDPDAAPSKPALPPSGPFITPLFNQNFTTIQPKFPSLFDCNLSPDDEPIDIEGSISAAVAEASRASSIAA 1760
WD40-rpts                                                                                      

Query     1761 TKDEPMDTSDKDIPSTSAAAGSSYPRY 1787
WD40-rpts                                 

1 WD40-repeats found in QUERY=T14G8.1 (Len=1787):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 13   979-1035     2.90  234.57  0.04211       20.0%     30.74

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  979-1035   EGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATAD-TVIIYD

   WD40 Template    TGECLRTLSGHTS------------------GVTSVSFSPDGKRLVSGSEDGTIKVWD