Input parameters:

  Query = T12A7.6 (Len=402)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (T12A7.6, Len=402):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAVPRRSNVQSMRRLLETKKEKTEEKEKDKVPTLSEICSSSITTSLFQNRIRWRKLSDLAFEFRYFSNDLKIPKPIQKSL 80  
WD40-rpts      (__________________________________________________________________________WD 1_

Query       81 RTAMENVLAEAKRWDAKHLEMFVEPAKSKRRALPKSELLRTFYSKLVWKRHSCEIDDVATCSHLIKTECKNWPLMQFQFA 160 
WD40-rpts      ________________________________________________________________________)       

Query      161 CLYAKTDLIYDDWKFDNYRLSCFRKQVGDHPVYDFWLTMMATINKDREFFGSSRRLPNQKVAQCFLFAIRNGYLQLVEYI 240 
WD40-rpts                                                                                      

Query      241 WNQITDRDREAIGLIEWRNMCYRARDGDAISFLCHNLCRMNALGTCRIAWAAFFDAFQHLVHDEKGKNDNLEKNQYRRKF 320 
WD40-rpts                                                                                      

Query      321 EFLLKHTCPTLRSRLVKHEHFRLLCDAFRYNEQEIFSLLHMYMSPADIASAREHIDRIFDRNKTKSGDRLRRTLMRRQQT 400 
WD40-rpts                                                                                      

Query      401 VQ 402 
WD40-rpts        

1 WD40-repeats found in QUERY=T12A7.6 (Len=402):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-153      2.82  231.08  0.04682       17.5%     -15.00

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-153    MAVPRRSNVQSMRRLLETKKEKTEEKEKDKVPTLSEICSSSITTSLFQNRIRWRKLSDLAFEFRYFSNDLKIPKPIQKSLRTAMENVLAEAKRWDAKHLEMFVEPAKSKRRALPKSELLRTFYSKLVWKRHSCEIDDVATCSHLIKTECKNWP

   WD40 Template    TGECLRTL---------------------SGHT---------------SGV------------------TSVS--------------------FS---------PD---GKRLV-----------------SGSEDGTIK----------VWD