Input parameters:

  Query = T08G5.8 (Len=205)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (T08G5.8, Len=205):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MHTSPANSSMSQAIYSNDSLTTTDGVLGDESLSSETSIVSFTGENANKQKRQRLSESTENSIPEPAFLRSNVTSLTTSES 80  
WD40-rpts                                                               (______________________

Query       81 DDIQQFFLENESLFQIEYKIDYKNYRDYTIVPSFGTVIPKSKCEIALICRPTGKSESDQMTISYKTVDSDNDLANGCFSE 160 
WD40-rpts      ____WD 1_________________________)                                              

Query      161 MEKIVIDIKGRSQESPIHSIPSSSGSSSTSSPSAKRRNIVDSDSD 205 
WD40-rpts                                                   

1 WD40-repeats found in QUERY=T08G5.8 (Len=205):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    58-114      3.16  245.03  0.03062       25.0%     -6.70

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   58-114    TENSIPEPAFLRSNVTSLTTSESDDIQQFFLENESLFQIEYKIDYKNYRDYTIVPSF

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPD-----------------GKRLVSGSEDGTIKVWD