Input parameters:

  Query = T08B2.7b (Len=755)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (T08B2.7b, Len=755):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLSRLVHQSSSTLRTNLSFRLFSQSAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESIKSI 80  
WD40-rpts                                            (__________________________WD 1___________

Query       81 VVMSGKPNSFVAGADIQMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGSCMGGGLELALACHYRIAVNDKKTL 160 
WD40-rpts      ______________)                                                                 

Query      161 LSLPEVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTGKKIKADKAKKIGIVDRVIQPLGDGLGPAAENTHKYLEEIAVKAA 240 
WD40-rpts                                                                                      

Query      241 QELANGKLKINRDKGFMHKATQAVMTNSLFLDNVVLKMAKDKLMKLTAGNYPAPLKILDVVRTAYVDPKKGFEAEAKAFG 320 
WD40-rpts                                                                                      

Query      321 ELSQTFQSKALIGLFDGSTDAKKNKYGKGLPVNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLN 400 
WD40-rpts                                                                                      

Query      401 KQVKRRKINKLEKERIYNHLVPTIDYSAMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTIIASNTSALPIKDIAAASS 480 
WD40-rpts                                                                                      

Query      481 RPDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGKLVVVVKDCPGFFVVRCLGPMTAEIMRLLQEGVDPA 560 
WD40-rpts                                                                                      

Query      561 ELDKLTTKFGFPVGAATLADEVGLDVAEHVAQFLGKALGPRLGGGSADLLSELVKAGHKGRKTGKGIFVYGDGKKGSKKV 640 
WD40-rpts                                                                                      

Query      641 NDEATKLLQKYKLTPNASVSSPEDRQIRLVSRFVNEALLCLEEGVLASPSDGDIASVFGVGFPPFWGGPFRFVDLYGADK 720 
WD40-rpts                                                                                      

Query      721 LVKSMEKFAGAYEAVQFEPCQLLKDHAKSGKKFYN 755 
WD40-rpts                                         

1 WD40-repeats found in QUERY=T08B2.7b (Len=755):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    39-95       2.93  235.49  0.04096       10.0%     16.01

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   39-95     GDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESIKSIVVMSGKPNSFVAGAD

   WD40 Template    TGECLRTLSGHTSGVTSVS-----------------FSPDGKRLVSGSEDGTIKVWD