Input parameters:

  Query = R151.2d (Len=446)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (R151.2d, Len=446):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFGGIRDRLFRFQKHNRSARNEFLGTHPTLPVPEDILDPFVGRSTRPTESLTEPPVATQTTQTVFLKPSDTPNQDISALD 80  
WD40-rpts                                                                                      

Query       81 KSVDHSHLHKDHSIHHPTPPRSFFSSSSLAVHPNVETAQSSSEEDLRMPNIKVFSGSSHPDLSTRICERLQLEVSKASLK 160 
WD40-rpts                                                                                      

Query      161 KFSNKETNVEIGESVRGEDVYIIQSAAGEINDNLMELLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKLVA 240 
WD40-rpts                                                                                      

Query      241 NMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAILKYIKESIPNWQTSVIVSPDAGGAKRVTSIADRLNVDFALIH 320 
WD40-rpts            (__________________________________WD 1__________________________________)

Query      321 KESKRANEVEKMTLVGSVEGKVAILVDDMADTCGTICMAADKLVEAGADKVYAFCVHGIFSGPALTRLNASKFEAVVVTN 400 
WD40-rpts                                                                                      

Query      401 TIPQDENMKKCSKIQCIDISMILAEAIRRTHNGESVSYLFSHVPIC 446 
WD40-rpts                                                    

1 WD40-repeats found in QUERY=R151.2d (Len=446):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   247-320      3.71  267.94  0.01515       15.0%     28.26

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  247-320    GADHIITMDLHASQIQGFFDIPVDNLYAEPAILKYIKESIPNWQTSVIVSPDAGGAKRVTSIADRLNVDFALIH

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVS-------------------GSEDGT---------------IKVWD