Input parameters:

  Query = R151.2b (Len=319)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (R151.2b, Len=319):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEINDNLMELLIMINACKIA 80  
WD40-rpts                                                                                      

Query       81 SSCRVAAVIPAFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAILKYIKESIP 160 
WD40-rpts                                             (__________________________________WD 1__

Query      161 NWQTSVIVSPDAGGAKRVTSIADRLNVDFALIHKESKRANEVEKMTLVGSVEGKVAILVDDMADTCGTICMAADKLVEAG 240 
WD40-rpts      ________________________________)                                               

Query      241 ADKVYAFCVHGIFSGPALTRLNASKFEAVVVTNTIPQDENMKKCSKIQCIDISMILAEAIRRTHNGESVSYLFSHVPIC 319 
WD40-rpts                                                                                     

1 WD40-repeats found in QUERY=R151.2b (Len=319):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   120-193      3.76  269.82  0.01430       15.0%     28.48

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  120-193    GADHIITMDLHASQIQGFFDIPVDNLYAEPAILKYIKESIPNWQTSVIVSPDAGGAKRVTSIADRLNVDFALIH

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVS-------------------GSEDGT---------------IKVWD