Input parameters:

  Query = R05A10.2 (Len=161)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (R05A10.2, Len=161):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSKLVHFVFFLSIALHVIARATESSESDTMESSRSSSSEEMRYNEDLEDLVKVDAGNSTIEEVKDSSENSKKSGEIEVKK 80  
WD40-rpts      (_____________________________________________________WD 1______________________

Query       81 ADKPAAENDLEKFDKGLNSDKKEYVQKRSHVDSISTNSTENLSDDEMDVMAHLNKTMDSEEDMQKNNETVLGIDTFGAPG 160 
WD40-rpts      _______________________________)                                                

Query      161 I 161 
WD40-rpts       

1 WD40-repeats found in QUERY=R05A10.2 (Len=161):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-112      3.30  251.02  0.02549       17.5%     -1.06

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-112    MSKLVHFVFFLSIALHVIARATESSESDTMESSRSSSSEEMRYNEDLEDLVKVDAGNSTIEEVKDSSENSKKSGEIEVKKADKPAAENDLEKFDKGLNSDKKEYVQKRSHVD

   WD40 Template    TGE-------------------CLRTLSGHTSGVTSV-----SFSP-------DGKRL-------------VSGS-----EDGT------------IKVW-----------D