Input parameters:

  Query = M110.9 (Len=144)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (M110.9, Len=144):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MIKNIAIVSVVFCAFVSTQRAPSTEVIDKILGSAETKTIEQINKEIDKLVEKLDEKTKQEHKAWKLRVEKDERERKSRIF 80  
WD40-rpts      (__________________________________________________________________WD 1_________

Query       81 KVLPKLSTRTQQKLIRIVMTQQNQTLSVGEKERILRHISTSMDNNTKNELARFLSDKDLFSLIY 144 
WD40-rpts      _________________________________________________________)      

1 WD40-repeats found in QUERY=M110.9 (Len=144):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-138      3.99  279.64  0.01056       22.5%      1.76

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-138    MIKNIAIVSVVFCAFVSTQRAPSTEVIDKILGSAETKTIEQINKEIDKLVEKLDEKTKQEHKAWKLRVEKDERERKSRIFKVLPKLSTRTQQKLIRIVMTQQNQTLSVGEKERILRHISTSMDNNTKNELARFLSDKD

   WD40 Template    TGE--------------CLRTLS--------GHTS-------------------------------GV-------------TSVSFS-------------PDGKRLVS-----------GSEDGTI--------KVWD