Input parameters:

  Query = M01G12.12 (Len=1579)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (M01G12.12, Len=1579):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSGQNGSIRLEFPEFDDSIDRIEYGIEMMLNSVPAILQHHKIDIKSRHEMEIVEEQDCDSFFEVNYDVASAKFDQTIIDA 80  
WD40-rpts                                                                                      

Query       81 MRAYLFSLNANWPRPYIVLHGSDFWAKTLDCYIEVPLAAMYFGNIQGYTYISHWQISFSGKKISADANELLNKIVAEFEF 160 
WD40-rpts                                                                                      

Query      161 DRADMITVTFQCLKRKRINYQTIIRKDTIRRIIVDPQVDMNKTRIHFELNCPPLIRQGSVDDDKPSTQKPFYKRTNRYSC 240 
WD40-rpts                                                                                      

Query      241 IGTKEYGSPHESAISDSPFFTIELQKQESDGNSGDSNDTLYRVLSRLRSRTGVQIEFANFPKVDVPIGKVYPYLRYPTSS 320 
WD40-rpts                                                                                      

Query      321 KSYAFECFIYNCFPSKMKIIDAQSINENDGRQFAITYLIECLLSRGAIVKDQVLTDEICWGQFLGLITHYYLENDKLCEA 400 
WD40-rpts                                                                                      

Query      401 ALEDLIYLIDGRKRIGSIWKCFHKICQKRLVMQLTNGMSEQEIEEGYQRVRKVIFTPTRVIYTPPEMIMGNRVLRNFDRD 480 
WD40-rpts                                                                                      

Query      481 GTHVLRVTFRDDNNRKMRANATGELLDICVKKYLEHGIVVANRDFGFLGCSSSQMRDNGAYFMVKNTDNRHKNACKMNSK 560 
WD40-rpts                                                                                      

Query      561 FKPNIDSVRNQLGNFLQIENIPKLMARLGQCFTQSRLTGVSLGPDNYCLTHDLSGGRSSNGSEYTFSDGVGMMSYEFAQE 640 
WD40-rpts                                                                                      

Query      641 VSRLMSFGRSVPSCFQFRYRGMKGVLAIDPLLDKERNWQEKHGISLSKNIKCVFRPSQIKFEGKQILGDQVEMVKYSSPV 720 
WD40-rpts                                                                                      

Query      721 LVALNKPLINILDQVSEMQSLECHRRITSRIEELMDLQTLSFAKQMTDEACFRNKLKEFPRRIDIDYLRTIWGFTLSNEP 800 
WD40-rpts                                                                                      

Query      801 FFRSLVKASIKFAITKQLFKEQIQIPSELGRSMLGVVDETGILQYGQVFVQYTKNHRNILPPRDSNRKVLGSEIVTGTVL 880 
WD40-rpts                                                                                      

Query      881 LTKNPGIVPGDVRIFEAVDIPELHHLCDVVVFPQHGPRPHPDEMAGSDLDGDEYSVIWDQKLLLERNEEAFDFAVEKNLQ 960 
WD40-rpts                                                                                      

Query      961 TYEWEDIDDLMRDVYVEYLKKDLVGLIANSHLHNSDQYGLTSRVCMNLAKKSCQAVDFSKSGKPPDELQTTWKTDDATGE 1040
WD40-rpts                                                                                      

Query     1041 MIPPERAERVPDYHVGSDHMPKYVSPRLCGKLFREFQGIDNAMKISEEKSEQYKIEVDESIRVDGFEEYMEDAKKQLASY 1120
WD40-rpts                                                                                      

Query     1121 NGQLKSTMDTYGIQSEGEIMSGCIIEMRNRISDSDQDDMSFYNTNRMIETKMTALVSKFRTIFFQQFGGFQEVCTLLPDA 1200
WD40-rpts                                                                                      

Query     1201 YNESNFFNFRCENPNEEIRKKAVAWYRACYECAKSTREPRKLSFAWIAYDVIAKIKETKVLENVEMNIGGANPMYTYLEH 1280
WD40-rpts                                                                                      

Query     1281 HRARYINDHVDDFEKFRRNLDNLITGKESKKAVFILQRYIYMIPGLDSVMFVLMRWGEALELFEGRSMSIYHFLLMFIMF 1360
WD40-rpts                                               (___________________________________WD 

Query     1361 STGQLASADGNAEQFFGKLDVEEYRRRKKNGTLEPDIPLTRHQRSDMMFKFFQLMGSRKFRTMRSISFRPLGFSSVFMSG 1440
WD40-rpts      1___________________________________)                                           

Query     1441 EWMVFHEPALKTYYNIMFNLRFEELPISTDPTTTHETRLRECEPFVIELPEKANMDMLIKKLTEKSKVSQLNLRRQDKNK 1520
WD40-rpts                                                                                      

Query     1521 KTSNSTVRYIVSASGTFESTQQLRKLVTVTSPIKNHWEGQDLAQQMANFCYLKIMKDDL 1579
WD40-rpts                                                                 

1 WD40-repeats found in QUERY=M01G12.12 (Len=1579):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 35  1322-1397     3.14  244.57  0.03105       12.5%     -4.54

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1322-1397   MIPGLDSVMFVLMRWGEALELFEGRSMSIYHFLLMFIMFSTGQLASADGNAEQFFGKLDVEEYRRRKKNGTLEPDI

   WD40 Template    TGECLRTLSGHTSG---------VTS-----------------VSFSPDGKRLVSGS----------EDGTIKVWD