Input parameters:

  Query = K10D2.1b (Len=669)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (K10D2.1b, Len=669):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGDVYVTSPTFVGHDTGSILAIDCHPSGKKFITCGQKARTSNGLVVVWNAEPVLDKKKASNENVPKLLFQVESQSQSNSC 80  
WD40-rpts             (__________________WD 1__________________)              (________________

Query       81 RWSPDGKRFAFGSDDSSVSVWEYVGLINSMGSITGGAQNVERYKECCVLRGHSMEVLTVEWSPNGKYLASGSIDYRIIIY 160 
WD40-rpts      _WD 2________________)                    (_________________WD 3________________

Query      161 NARKLPDRITVLNDIQLPVKGLSWDPIGKYLASLEGDKKLRFWATDSWQCVKSVTEPFESNIEETMLTRLDWSPDGKYLM 240 
WD40-rpts      )    (_________________WD 4________________)   (______________________WD 5______

Query      241 TPAAVRSGKPLIKLIQRQTWKSDQFLAGHHKGTTCVRAMPRLIEANLKNGKRMQLTCAAVGSRDKSISIWVFPGTLKPLF 320 
WD40-rpts      _______________)   (_______________________WD 6_______________________)   (_____

Query      321 VINNIFNHTVMDFAWCGRNLLACSQDGTVKVIHLSESVIGEMISNEAMSDLCYQIYSIRPPRYELTDKEEDESQDSFNLS 400 
WD40-rpts      ____________WD 7________________)   (__________________WD 8__________________)(_

Query      401 DLSSSANNASFVTCPEDVLIKRKKLVAAQQSSDIQLTKSMEDNSKENESKNSEKTMMEERNKQIDVRKDGKRRIQPVFCG 480 
WD40-rpts      _________WD 9__________)                                          (_____________

Query      481 TTTADPMTSLSSEGKKTVAPPPAKRKALAPAVPAKKGEVDLEDSSDSDDDDEEEEEDMEISDIESVRNKKRKVPATTSQP 560 
WD40-rpts      ______WD10___________________)                                                  

Query      561 MLALDLKKPALRPMEPKSLKTQEGTVLMEAPEQQPKLSQHVVDRKGMFVEIDNRWKHGGVETTQIKLIKKKQQTAENEDD 640 
WD40-rpts                                                                                      

Query      641 MMDGERRVNHECLWMAVLGSPVIIVAANK 669 
WD40-rpts                                   

10 WD40-repeats found in QUERY=K10D2.1b (Len=669):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2     8-49       5.71  350.68  0.00117       25.0%     47.71
  WD 2:  Seg  6    64-102      7.95  442.98  6.7e-05       35.0%     50.14
  WD 3:  Seg 10   123-161      8.26  455.83  4.5e-05       37.5%     55.93
  WD 4:  Seg 14   166-204      8.49  465.40  3.3e-05       25.0%     46.39
  WD 5:  Seg 17   208-256      5.40  337.67  0.00175       25.0%     54.48
  WD 6:  Seg 21   260-311      6.46  381.59  0.00045       30.0%     53.47
  WD 7:  Seg 25   315-353      7.63  429.78  0.00010       25.0%     55.08
  WD 8:  Seg 29   357-398      5.50  341.66  0.00155       15.0%     38.00
  WD 9:  Seg 32   399-424      3.49  258.87  0.02003       17.5%     16.87
  WD10:  Seg 35   467-510      5.23  330.75  0.00217       20.0%      4.49

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    8-49     ----SP----TFV------GHDTG--SILAIDCHP-------------SGKKFITCGQKARTSNG----LVVVWN
   WD 2   64-102    -VPKLL----FQV------ESQSQ---SNSCRWSP-------------DGKRFAFG-----SDDS----SVSVWE
   WD 3  123-161    -YKECC----VLR------GHSME---VLTVEWSP-------------NGKYLASG-----SIDY----RIIIYN
   WD 4  166-204    -PDRIT----VLN------DIQLP---VKGLSWDP-------------IGKYLASL-----EGDK----KLRFWA
   WD 5  208-256    -WQCVK----SVTEPFESNIEETM---LTRLDWSP-------------DGKYLMTP-----AAVRSGKPLIKLIQ
   WD 6  260-311    -WKSDQ----FLA------GHHKG---TTCVRAMPRLIEANLKNGKRMQLTCAAVG-----SRDK----SISIWV
   WD 7  315-353    -TLKPL----FVI------NNIFN---HTVMDFAW-------------CGRNLLAC-----SQDG----TVKVIH
   WD 8  357-398    -SVIGE----MIS------NEAMSDLCYQIYSIRP-------------PRYELTDK-----EEDE----SQDSFN
   WD 9  399-424    ---------------------------LSDLSSSA-------------NNASFVTC-----PEDV----LIKRKK
   WD10  467-510    RKDGKRRIQPVFC------GTTTA---DPMTSLSS-------------EGKKTVAP-----PPAK----RKALAP

   WD40 Template    TGECLR----TLS------GHTSG---VTSVSFSP-------------DGKRLVSG-----SEDG----TIKVWD