Input parameters:

  Query = K08F4.12 (Len=93)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (K08F4.12, Len=93):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTRARKVQWADDDDETVENQKISSSNSECLKKSNSITKKLVQVRNYSGYAESHADEKIVESSPVQRKTRKFDRNLSTVHE 80  
WD40-rpts      (_____________________________________WD 1____________________________________) 

Query       81 EEDDVNESSDENV 93  
WD40-rpts                   

1 WD40-repeats found in QUERY=K08F4.12 (Len=93):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-79       3.13  243.92  0.03168       20.0%      2.04

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-79     MTRARKVQWADDDDETVENQKISSSNSECLKKSNSITKKLVQVRNYSGYAESHADEKIVESSPVQRKTRKFDRNLSTVH

   WD40 Template    TGECLRTLSGHTSG------VTSVSF------SP------DGKRLVSG-------------SE--------DGTIKVWD