Input parameters:

  Query = K07G5.3 (Len=1202)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (K07G5.3, Len=1202):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRRNSVSVEDGIVRPETEQTLASRKNKPEKLFLRSASVGLAPGDGEQSPSPGPFTKDEKDKKQNRRESIKEHLMKFKAKA 80  
WD40-rpts                                                                                      

Query       81 GKILEEKQSVKPINEESQNSMSFLSQTSEGEQKEELSVGVVDEQASESSIQQEARKESKEQLRNRIRKSAQKAVERTRGN 160 
WD40-rpts                                                                                      

Query      161 VQLNRRLARRPTVVMEEHLDENDLFAIDEQVERTIKMGEKYLVANETTNAAERDIEEFFETKPKESDEQKKEEPRKVIYG 240 
WD40-rpts                                                                                      

Query      241 RVEEVKYQHDLLVKYVLRDSNIVAGEIVPKEVRRQATILPTRVEYSEDSVSLYTAPEVMDNVISQTRNRRYVQLDVFIDS 320 
WD40-rpts                                                                                      

Query      321 VHFDHHYLWSDEEVTAAELRNEFMVQLLRVHEIAQLERHHLDVDRQPRMKEQVRKGRLELERLGDVLNETRKSQGYTATT 400 
WD40-rpts                                                                                      

Query      401 AFFTPAKSPWEIEDWASYGSVNKSAKLSPIGKIPKTSRERIALMRRTNVQMVLYFNDMEVSRTAWIPLSCDVMTAVKRFE 480 
WD40-rpts                                                                                      

Query      481 MELYSPMKSLELMVLEQCNGKIRVLGKGRIPLPSEDDLEIALHEVVFENDSFMKPVAGSLGSDSQRKETGRILCRAMLED 560 
WD40-rpts                       (________________________________________WD 1__________________

Query      561 GELKIADDRLLAESMQERRKQTFELIPSELVLGNLNQEDDKKRLEELREEDRAQKRFAYRSAIDSRRISALQFANLARKR 640 
WD40-rpts      _____________________)                                                          

Query      641 VMDRRQRKERKYEEIVREESIPTLSVAFSQLFGPADVSRRLKPMRKDERAREEGWDNTIIVNIQSAINLPVRTSGQVQPF 720 
WD40-rpts                                                                                      

Query      721 VIVSYSGKRINTDVAVGRHPNWQFTGKLTISKEDREHEFIEIKVYDQLVESIDKDDRIHNVVHEQLTARLLGTQRIRFET 800 
WD40-rpts                                                                                      

Query      801 LAVVSKISSPIRLNIPLYISNYKISPESSFLKVLFSTQIDPKSQIEYTMSTSSFETGKTLEKCSNLEKHVRELFPKRISR 880 
WD40-rpts                                                                                      

Query      881 PLVTDLNSHSTVCTRYLRPIAPPQIVMQENASNLPLICRLAAKIVSGMPRVDSTSHSDIWGNVFQLTSIAVGGIEERSTL 960 
WD40-rpts                                                                                      

Query      961 LGCWLLHFRLPVAIVLGEARGEKTGFVLTELEGKQVLIDPDDGHIYPILDSNCALEKIYGAFDNKNYYANVQSYDQTPQI 1040
WD40-rpts                                                                                      

Query     1041 SLNLDKYTNWKPLFNVNEEPLESIQTATVRYSKLPEDWIVELRISLEREIKIRFDESRKHAIPQWHLVAARQLREILENP 1120
WD40-rpts                                                                                      

Query     1121 RGITESSVEERIVRLKEGYELTVIIIRVNYSSMEECVHEVLSNRLQDTPDLNSQFAIAVNVIDFFAHVIQIDIALAVLKP 1200
WD40-rpts                                                                                      

Query     1201 KR 1202
WD40-rpts        

1 WD40-repeats found in QUERY=K07G5.3 (Len=1202):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 13   498-582      3.27  249.67  0.02656       27.5%     11.65

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  498-582    CNGKIRVLGKGRIPLPSEDDLEIALHEVVFENDSFMKPVAGSLGSDSQRKETGRILCRAMLEDGELKIADDRLLAESMQERRKQT

   WD40 Template    TGECLRTLSGHTSGVTSVSF-----------------------SPDGKRLVSG-------SEDGTIKVWD---------------