Input parameters:

  Query = H10E21.4 (Len=236)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (H10E21.4, Len=236):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MIRQSVFLLAAIGATVFAQNDSFDLVDANNDGKLSEKELITFMRKRGRPDGQEYFQRFDLDRNGHLDISEFVPLVYEMSR 80  
WD40-rpts                                 (____________________________________________________

Query       81 RPVDMDYEFFKKMDLNDDGIVDKAEVEKIRKDNNDRIIDGILSIADTNRDGQLTYAEFKNHLSSGAKSLSPAEEQRNQAL 160 
WD40-rpts      _______________WD 1_____________________________________________________________

Query      161 QLLSFIDANGDNKLDQLELYTFSQKTSTNKVTKSDVQQIFAMLDKNQDGYLTENELLQLAQQFSTIGNVRSTIPKV 236 
WD40-rpts      ______)                                                                     

1 WD40-repeats found in QUERY=H10E21.4 (Len=236):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    28-167      2.91  234.90  0.04169       17.5%     -8.09

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   28-167    ANNDGKLSEKELITFMRKRGRPDGQEYFQRFDLDRNGHLDISEFVPLVYEMSRRPVDMDYEFFKKMDLNDDGIVDKAEVEKIRKDNNDRIIDGILSIADTNRDGQLTYAEFKNHLSSGAKSLSPAEEQRNQALQLLSFID

   WD40 Template    GECLRTLS-----------G--------------HTSGVT------------SVSF----------SPDGKRLVS-----------G-------------SEDGTIK----------------------------VW--D