Input parameters:

  Query = FBpp0293253 (Len=787)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0293253, Len=787):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEPSLDNYKLSCELLGHSMDVRAVAVGPPTPEGRQTILSGSRDKSTKVWKPHGNEYLESLTLQDHKNFISYICFLESERW 80  
WD40-rpts            (___________________WD 1___________________)(___________________WD 2______

Query       81 ICTASNDATICIYKQDGFVPLLTLKGHESTVCALSAGLEPRSLISGSWDKTARVWTISEAGDVSFVALEGHEAAVWAVAT 160 
WD40-rpts      _____________)   (_________________WD 3________________)(___________________WD 4

Query      161 LKEQRKYVTGGADRNIYYWNAKGEKLRLLKGHTDCVRGVMGLDANTLLSCGNDAVLRFWNEDGECVREMNGHSNYIYSMA 240 
WD40-rpts      ___________________)  (________________WD 5________________)  (_________________

Query      241 RNEALGDQVVVSCGEDSTLRMWNVITGDELGAPIIHPGISVWSVTCLQNGDIVTGCSDGVVRVFSHVPARQASEAVLKAF 320 
WD40-rpts      _WD 6_________________)   (_________________WD 7________________)               

Query      321 DLVVATRKSQINEEIGGVKKTDLPGPEALLSNGTREGQTKMVRHADGSVKCYTWTLGNWNLVGDVTGATGGTQSNSGKKL 400 
WD40-rpts          (_________________WD 8________________)(___________________WD 9_____________

Query      401 HEGKEYDFVFSVDISDTEPPIKLPYNRSDDPWQAAQTFIHRHSLPQAYLDQVANFIIKNSEGPVLMEQAPTGYQDPFTGG 480 
WD40-rpts      ______)                                                                         

Query      481 SRYVPGSSNTNMGSGGNVDPFTGASSYSTASSNAQSQVDVNFVRSGDKHFPVSNYRIFDTCDAKKVLEKMIEFNGKLSLP 560 
WD40-rpts                                                                                      

Query      561 DGRVGEEVLLAVIKLADQSPELDLTSLEALAILLKWPASMQFPVLDILRLAVRNEAIFSVLNNSHNFLATVIPQLSGSAP 640 
WD40-rpts                                                                                      

Query      641 NQLMVVRCLANIMSHAAGRQNVMSRLAEIIDLVGAIKTGSANLQIAVATFYLNLTISQTLDVAKSEVCHVVTSGIVELLK 720 
WD40-rpts                                                                                      

Query      721 WAKDLEACYRSMQAIGNLTTTSCGQETIAQVVSVDYVMDKLRELTITPQDKNFSKVNSVGQALLAVF 787 
WD40-rpts                                                                         

9 WD40-repeats found in QUERY=FBpp0293253 (Len=787):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     7-50       7.11  408.46  0.00019       32.5%     54.87
  WD 2:  Seg  5    51-94       6.68  390.48  0.00034       20.0%     54.74
  WD 3:  Seg  9    98-136      9.07  489.35  1.6e-05       40.0%     54.04
  WD 4:  Seg 13   137-180      8.10  449.40  5.5e-05       27.5%     52.74
  WD 5:  Seg 17   183-220      7.42  421.27  0.00013       37.5%     51.50
  WD 6:  Seg 21   223-263      8.38  460.92  3.8e-05       32.5%     56.31
  WD 7:  Seg 25   267-305      5.05  323.09  0.00275       30.0%     50.87
  WD 8:  Seg 29   325-363      4.84  314.43  0.00360       15.0%     43.91
  WD 9:  Seg 33   364-407      5.04  322.66  0.00279       22.5%     43.46

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    7-50     NY----K----LSCELLGHSM-DVRAVAVGP--PTPEGRQTILSGSRDKSTKVWK
   WD 2   51-94     PH----GNEYLESLTLQDHKN-FISYICFLE--SE----RWICTASNDATICIYK
   WD 3   98-136    -F----V----PLLTLKGHES-TVCALSAGL--EP----RSLISGSWDKTARVWT
   WD 4  137-180    IS----EAGDVSFVALEGHEA-AVWAVATLK--EQ----RKYVTGGADRNIYYWN
   WD 5  183-220    -G----E----KLRLLKGHTD-CVRGV-MGL--DA----NTLLSCGNDAVLRFWN
   WD 6  223-263    -G----E----CVREMNGHSN-YIYSMARNEALGD----QVVVSCGEDSTLRMWN
   WD 7  267-305    -G----D----ELGAPIIHPGISVWSVTCLQ--NG----D-IVTGCSDGVVRVFS
   WD 8  325-363    -A----T----RKSQINEEIG-GVKKTDLPG--PE----ALLSNGTREGQTKMVR
   WD 9  364-407    HADGSVK----CYTWTLGNWN-LVGDVTGAT--GG----TQSNSGKKLHEGKEYD

   WD40 Template    TG----E----CLRTLSGHTS-GVTSVSFSP--DG----KRLVSGSEDGTIKVWD