Input parameters:

  Query = FBpp0293062 (Len=432)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0293062, Len=432):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSVKLLIVALSLCLLQSGIVEGISLSLGDITLFNVNFKTPTFLGRSVAVDSNVRLENDVDPNIQEDSHLNTYSLIKKYGY 80  
WD40-rpts                                                                                      

Query       81 PAENHTLETDDGYILTLHRIARPGATPVLLVHGLLDSSATWVMMGPNKGLGYLLYDQGYDVWMANVRGNTYSRKHVKYST 160 
WD40-rpts                                                                                      

Query      161 HHAKFWDFTFHEMGKHDIPATMDYILNSTGVSQLHYIGHSQGTVVFWIMASEKPEYMDKIILMQGLAPVAFLKHCRSPVV 240 
WD40-rpts                                  (___________________________________________________

Query      241 NFLAEWHLSLVLKLIGVHEFLPKNEFISMFNRIICDETTITKEICSNVIFLTTGFDKLQLNETMLPVIVGHSPAGASTKQ 320 
WD40-rpts      _____________________WD 1_______________________________________________________

Query      321 MQHFGQLNRSGGFRQYDHGWLRNHWIYGTIDPPSYHLENVRAKVALYYGQNDWLAPPEDVEMLNRKLPNVVEKYLVDDKE 400 
WD40-rpts      ________________)                                                               

Query      401 FNHLDFIWGIDARELLWDRMLEIMRNHENSII 432 
WD40-rpts                                      

1 WD40-repeats found in QUERY=FBpp0293062 (Len=432):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   189-337      3.00  238.45  0.03743       25.0%     10.07

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  189-337    TGVSQLHYIGHSQGTVVFWIMASEKPEYMDKIILMQGLAPVAFLKHCRSPVVNFLAEWHLSLVLKLIGVHEFLPKNEFISMFNRIICDETTITKEICSNVIFLTTGFDKLQLNETMLPVIVGHSPAGASTKQMQHFGQLNRSGGFRQYD

   WD40 Template    TGECLRTLSGHT--------------------------------SGVTS--------------------VSFSPD-------------------------------------GKRL--------VSGSE------------DGTIKVWD