Input parameters:

  Query = FBpp0291762 (Len=404)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0291762, Len=404):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSKRRLGSVRPPKRCRSDMDNTSTSDIVIINGNSHPDLANMVAERMGIKNGGCSVFHKSNRETIVEISDSVRGKDIYIIQ 80  
WD40-rpts                                                                                      

Query       81 TGTKDANNNIMELLIMAYACKTSSARSIVGVIPYLPYSKQCKMRKRGCIVSKLLAKMMCTSGLTHIITMDLHQKEIQGFF 160 
WD40-rpts                                                                   (__________________

Query      161 DIPVDNLRASPFLLQYIQESIPDYRNSVIVARNPGVAKKANSYAERLRLGLAVIHGEQKETDADEVDGRYSPPPTSAYSN 240 
WD40-rpts      ________________WD 1__________________________________)                         

Query      241 LLGNSVEMCLPATPRNSTPQHAPTSSARQRTTSVSVGVPEHIVKVKPPLTIVGDVSGRIAIMVDDLIDDVQAFVAAAEML 320 
WD40-rpts                                                                                      

Query      321 KENGACKIYVLATHGLLSSDAPRQLDESPIDEIVVTNTIPHEIQKLQCHKIKTIDISILIAEAIRRIHNKESMSYLFRNV 400 
WD40-rpts                                                                                      

Query      401 TLED 404 
WD40-rpts          

1 WD40-repeats found in QUERY=FBpp0291762 (Len=404):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   142-215      3.06  241.24  0.03438       12.5%     26.19

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  142-215    GLTHIITMDLHQKEIQGFFDIPVDNLRASPFLLQYIQESIPDYRNSVIVARNPGVAKKANSYAERLRLGLAVIH

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVS-------------------GSEDGT---------------IKVWD