Input parameters:

  Query = FBpp0291686 (Len=359)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0291686, Len=359):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MMSYAFFNNGKVHSKLILGDYAGNVRVLSYSPHLRGPFQAKPGAALIEVVWSDILRGKIPQFFPKEYINLHNEMVSCVYF 80  
WD40-rpts                 (__________________WD 1_________________)         (_________________W

Query       81 SLHMNALFASAEYRNTKKYRGRCPGMIMVTYDERSNFRIPLGVSTFFVAESHNIVVTGGPDTFVRIWDVYIPTEPSAILT 160 
WD40-rpts      D 2_________________)   (___________________WD 3___________________)    (_______

Query      161 GHNGGIVLVFVQPEENKVYSVDYQKIIKVWDLHEHTLLQTYGDLVRLIHHSETDLTYYYHSHLRELVVAGRKLISIKCCP 240 
WD40-rpts      __________WD 4________________)          (_________________WD 5________________)

Query      241 RVRVDLTDGNTHAAPVSVVLYNRLFRNIVSCGLDSYIIVWDPWTGRRKIIMKSCHTKMIYGEIIDIEITAACFDPLEQFL 320 
WD40-rpts        (_________________WD 6________________)           (__________________WD 7_____

Query      321 LTGARDGSLKIWNYNNAVVVRNMSIMPDQEVTAVIWVVD 359 
WD40-rpts      ____________)                          

7 WD40-repeats found in QUERY=FBpp0291686 (Len=359):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    12-52       7.15  409.91  0.00019       20.0%     46.70
  WD 2:  Seg  5    62-101      6.32  375.67  0.00054       22.5%     46.20
  WD 3:  Seg  9   105-148      7.89  440.48  7.2e-05       22.5%     57.65
  WD 4:  Seg 13   153-191      9.44  504.66  9.8e-06       32.5%     54.18
  WD 5:  Seg 18   202-240      5.97  361.13  0.00085       20.0%     44.62
  WD 6:  Seg 21   243-281      8.56  468.08  3.1e-05       27.5%     50.15
  WD 7:  Seg 26   293-333      7.86  439.21  7.5e-05       22.5%     51.81

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   12-52     -VHS-KLILGDYAG-----NVRVLSYSPHLRGPFQ-AKPGAALIEVVWS
   WD 2   62-101    -FFP-KEYINLHNE-----MVSCVYFSLH--MNALFASAEYRNTKKYRG
   WD 3  105-148    -GMI-MVTYDERSNFRIPLGVSTFFVAES--HNIV-VTGGPDTFVRIWD
   WD 4  153-191    -TEP-SAILTGHNG-----GIVLVFVQPE--ENKV-YSVDYQKIIKVWD
   WD 5  202-240    --GD-LVRLIHHSE-----TDLTYYYHSH--LRELVVAGRKLISIKCCP
   WD 6  243-281    -RVD-LTDGNTHAA-----PVSVVLYNRL--FRNI-VSCGLDSYIIVWD
   WD 7  293-333    SCHTKMIYGEIIDI-----EITAACFDPL--EQFL-LTGARDGSLKIWN

   WD40 Template    TGEC-LRTLSGHTS-----GVTSVSFSPD--GKRL-VSGSEDGTIKVWD