Input parameters:

  Query = FBpp0290373 (Len=405)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0290373, Len=405):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRRERVVLLCLALLGLQQVSRATLRQSREIIITDAVRRIQNDGYNVERHSVTTKDGYVLTLHRIPQVDPELGSLLRRPVV 80  
WD40-rpts                                                                                      

Query       81 FLLSGLYASSDVWLLNGREDSLAYLLWRAGYDVWLGNNRGNIYCRKNMWRNTTEREFWDFSWHEMGVYDLPAQVDYVLRT 160 
WD40-rpts                                                                                      

Query      161 TGQKAMHFVGISQGGTVFLVLNSMMPQYNAVFKSATLLAPVAYVSNTKSGLAKVIGPVLGTRNYVSKMLEGVEMFSTNKF 240 
WD40-rpts      (_________________________________________________WD 1__________________________

Query      241 FKKFLSMTCLENEKPLVCISRLWPAVGYDTRFLNKTLLPDLMANFPAGGSVKQLMHYFQGYVSTRFRQYDYGPERNWLHY 320 
WD40-rpts      _______________________)                                                        

Query      321 QQLEPPEYALENVSTPVTVFFSENDYIVAPADIWRLLTRLPNVEAVYKVPWKRWNHFDFICGLGVREYIFDNIVLSMNRY 400 
WD40-rpts                                                                                      

Query      401 EQRRR 405 
WD40-rpts           

1 WD40-repeats found in QUERY=FBpp0290373 (Len=405):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   161-264      2.96  237.04  0.03908       25.0%     11.80

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  161-264    TGQKAMHFVGISQGGTVFLVLNSMMPQYNAVFKSATLLAPVAYVSNTKSGLAKVIGPVLGTRNYVSKMLEGVEMFSTNKFFKKFLSMTCLENEKPLVCISRLWP

   WD40 Template    TGECLRTLSGHT--------------------------SGVTSVSFSP---------------------DGKRLVSG------------SEDGTI-----KVWD