Input parameters:

  Query = FBpp0290029 (Len=457)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0290029, Len=457):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAIAFNIAIYAIILVGSLVPSKTQEWVPYAYPVDENQGLNEQTQWQSQSQIQSQGTSQSQSQAQIQSQPEPRSCLQCQQA 80  
WD40-rpts                                                                                      

Query       81 SYQQFFAEVDIQIDAKLETPKMISKYGHQVETHYAFTADGYKLCLHRIPRSGATPVLLVHGLMASSATWVQFGPSQGLAY 160 
WD40-rpts                                                                                      

Query      161 ILSQSGYDVWMLNTRGNVYSEERLAGRESDKIFWDFSFHEIGQYDLPAAIDLILLQTKMPSIQYIGHSQGSTAFFVMCSE 240 
WD40-rpts                                                              (_______________________

Query      241 RPEYAGKISLMQSLSPSVYMEGTRSPALKFMKLFSGGFTMLLNLLGGHKISLKNKIVDMFRNHICTKLIPSRICAIFEFV 320 
WD40-rpts      _________________________________________________WD 1___________________________

Query      321 VCGFNFNSFNMTLSPILEGHASQGSSAKQIYHFAQLQGNSAFQKYDYGLILNKIRYQSIFPPLYNLSLALGKVALHRGDG 400 
WD40-rpts      _____________________________________________)                                  

Query      401 DWLGSESDVLRLERDLPNCIENRNIRFEGFSHFDFTISKDVRSLVYDRVISLCGSNR 457 
WD40-rpts                                                               

1 WD40-repeats found in QUERY=FBpp0290029 (Len=457):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   217-366      3.10  242.55  0.03303       25.0%     11.27

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  217-366    TKMPSIQYIGHSQGSTAFFVMCSERPEYAGKISLMQSLSPSVYMEGTRSPALKFMKLFSGGFTMLLNLLGGHKISLKNKIVDMFRNHICTKLIPSRICAIFEFVVCGFNFNSFNMTLSPILEGHASQGSSAKQIYHFAQLQGNSAFQKYD

   WD40 Template    TGECLRTLSGHT--------------------------------SGVTS----------------------VSFSPD------------GKRLV---------------------S-----------GS------------EDGTIKVWD