Input parameters:

  Query = FBpp0289520 (Len=743)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0289520, Len=743):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDVEDSVASGAASACKRQKRNTDSQNDGEPEDAAQIGEENTVAESQPLINFDTIVTHNNNGESDMEGKENQLQDESEQSE 80  
WD40-rpts                                                                                      

Query       81 EHLANKVGPEELPEIEQAGSSNLAHQLSPEAASTVLASDEPDASTGVIEPSDSEDYPPTSPTPIEASEAVSSPRFNPRNI 160 
WD40-rpts                                                                                      

Query      161 PPTRSYRRISIELVGSYSDTSDSEEHELEEGTEHAEEYSDDAPEPHIAESADDSSSNDDMGPYSLSSEDETTTEDEVEFN 240 
WD40-rpts                                                                                      

Query      241 EDINPADREKVDYAVNQVMCKCKPKYTWNYDQELLQREHNIINRIDWRGGHTSASSFGQGYYGSRQVVEQMTLLSSLNVH 320 
WD40-rpts                                         (_____________WD 1____________)    (_________

Query      321 HGCVNSLNFNRAGDLICSGSDDLTIVVWDWAKEKQLHRFRSGHNMNIFQTKFIDSAGCLDIVSSSRDGQVRRSVIPPSGG 400 
WD40-rpts      ________WD 2________________)     (_________________WD 3_________________)(_____

Query      401 VIKPIRLYTHSESVHKIIVVPHSRHELMSAGEDAAVKHFDLRASNAATTMMRCVYNDENERGRVRLFSIAHHPYAPEFCV 480 
WD40-rpts      _______________WD 4____________________)               (_______________WD 5_____

Query      481 SGSDDILRVYDKRNLAKAIHQMAPRNLLEAQITQITCAVYNHSGSEILASYSDAGIYLFDSRNYNRGDYLHCYKGHINSR 560 
WD40-rpts      __________)         (_________________WD 6_________________)      (_____________

Query      561 TIKGVNFFGPRSEYIVSGSDCGNIFFWDKNTEAIINYMKGDHVGVVNCLEPHPWMPVLATSGLEHDVKIWTPQGPERKLP 640 
WD40-rpts      _____WD 7__________________)   (_________________WD 8_________________)         

Query      641 EDLLKQTLQRNFRCNIVESIDLDINNFQYFIRGFLQGSGASHLRQRHTSSLGHQMRDNSSSRSNGSNASNPTSHRRNSNS 720 
WD40-rpts                                                                                      

Query      721 SDDTNDEGADADAALDTLHCRTQ 743 
WD40-rpts                             

8 WD40-repeats found in QUERY=FBpp0289520 (Len=743):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   276-306      4.96  319.61  0.00307        7.5%     25.67
  WD 2:  Seg  5   311-349      9.57  509.85  8.4e-06       40.0%     43.05
  WD 3:  Seg  8   355-394      7.15  410.05  0.00019       25.0%     45.82
  WD 4:  Seg 11   395-440      6.87  398.63  0.00026       25.0%     54.07
  WD 5:  Seg 16   456-491      6.60  387.39  0.00037       15.0%     42.85
  WD 6:  Seg 19   501-540      9.70  515.52  7.0e-06       15.0%     46.32
  WD 7:  Seg 22   547-588      8.19  453.13  4.9e-05       37.5%     54.02
  WD 8:  Seg 26   592-631      7.31  416.53  0.00015       17.5%     53.18

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  276-306    --------------Q-REHNIINRI---DWRGGH--TSASSFGQGYYGSRQ
   WD 2  311-349    -MTL-----LSSLNV-HHGCVNSLN---FNRAGD--LICSGSDDLTIVVWD
   WD 3  355-394    --QL-----HRFRSG-HNMNIFQTK---FIDSAGCLDIVSSSRDGQVRRSV
   WD 4  395-440    IPPSGGVIKPIRLYT-HSESVHKII---VVPHSR-HELMSAGEDAAVKHFD
   WD 5  456-491    NDE---------NER-GRVRLFSIA---HHPYAP--EFCVSGSDDILRVYD
   WD 6  501-540    QMAP-----RNLLEA-QITQITCAV---YNHSGS--EILASYSDAGIYLFD
   WD 7  547-588    -GDY-----LHCYKG-HINSRTIKGVNFFGPRSE--YIVSGSDCGNIFFWD
   WD 8  592-631    -EAI-----INYMKGDHVGVVNCLE---PHPWMP--VLATSGLEHDVKIWT

   WD40 Template    TGEC-----LRTLSG-HTSGVTSVS---FSPDGK--RLVSGSEDGTIKVWD