Input parameters:

  Query = FBpp0289468 (Len=1590)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0289468, Len=1590):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDSILAAVGGAGGVVVEAQGHGPRVQVTYFTYLTELFQQRTNNSHGHVHSATGVATDRTADRSHGHNHGIHGGHVEQIEL 80  
WD40-rpts                                                                                      

Query       81 LIDEKCRILNKTGTPKSSALHLANWMKGQLDKQQQQARLAAIARSQENVSAEDEQLIFNSDSEQDERITYWTRQQLEKRT 160 
WD40-rpts                                                                                      

Query      161 KELNLAKENGGLSARPNFGGKRLSGVEELSMSATSDIYSTSEAEGVTSVISQSHSTTSDSQITVRSSPIVLDKLAVCRHC 240 
WD40-rpts                                                                                      

Query      241 HKNCQQSGPGGARPGGGGGVNNSSSTPVLLCNSLKVQHSQSSPNRCCKLSNGIAGATEMANPKNSNRTGTGTGSVTSMSS 320 
WD40-rpts                                                                                      

Query      321 STITGELSSKVVASSSRRETGDTESDVAQLITDEISQSQSEATDDSVGAMPNSSRSAGEGNPVITGSRLRHLDPPVSVSS 400 
WD40-rpts                                                                                      

Query      401 LPNGHCSAGVGGGSPKPLPPPRRTRVVAQMCQEPPRPKANQQVKAIVTITETARIMRSSPTKGSGSGSATGTGSVGGSPA 480 
WD40-rpts                                     (____________________WD 1____________________)   

Query      481 KYAACHCRCTPEDFTHAQLSPDKMEHQTCKLLESPKQTTTTLEQKQEDEQLSLMLIGLAQLAPAATLCGQERIPKEENST 560 
WD40-rpts                                                                                      

Query      561 PTIAVVPPTPDSVLTKTSTHVWDNSGCSSNGGGTSTTSTATTTTKQPRQAIIENIPEDSCDESPLDEEPPYRPMSSALRR 640 
WD40-rpts                                                                                      

Query      641 FGTMSSLEKLPSDDRMDEADELDDDLDSFKPNGHDGNSPQNEEDDEDADSERALVQNDLGASSSSGVIVNGEGLASGAWT 720 
WD40-rpts                                                                                      

Query      721 NRAGAYVSDKMSFFEESRAFIDKYLGRWNAGDAQQQHQQGTASETDEQMDECTSGATSGEEVWGTPTSGGDNDDQDLQLI 800 
WD40-rpts                                                                                      

Query      801 NSENTHSSPTKSSTSLNDDDDTELMMDELLMAPPMTASTIRGLLPRFYRRRLEPLFEEETESDEEKTQQDSDDIKKGEAT 880 
WD40-rpts                                                                                      

Query      881 TNGHYLEDSAGSSSDSESVPPAPPLVPRPVVPDREEDPSAEGQQENLAMEDQEDLHSSVERLLPNLATSAMGPRPLLTTR 960 
WD40-rpts                                                                                      

Query      961 LLPTTAIDPQPPAVLVASSCEYLLDQRPSSVPGRDLAGGSIGTTTMTSSRPTPLSPAKAAATPIGMNATMTTKTTTTTMM 1040
WD40-rpts                                                                                      

Query     1041 TPSRAPSSTISTISSASDTTSSGGRASGRPPRFVPPPPPPRRLLLTQTDLIAGQAKTELPRKKSGATADSGCSVAVGDAA 1120
WD40-rpts                                                                                      

Query     1121 SASDPTAIGSRTMPSTPSTSSLASAVAPKRPSSTIIETCLLGAPRPASATSSATASRMAKPIRQSPPTQHQSQPRGQSCP 1200
WD40-rpts                                                                                      

Query     1201 AAVPAPSTAAPDAPTVPMPHAGCGLSPRLEMRLALNHDILGDEDLICYEPGPDLTTILGHDLSTFHRLTGRDLLSRSATN 1280
WD40-rpts                                                                                      

Query     1281 RVQPKEAVISYSQQRNSKMDTPTVNRRPRPLSAGALGGSTSNSNPNNSRSSSSHGNSPLGGGLTRAGVEPVGQQQLVVQA 1360
WD40-rpts                                                                                      

Query     1361 GGGSAGRVGGGSGSAGGNSTACSSNRGGSKLGDLEILARREKIYSMSQSRSGCRVRETTSTTTLMAMATEMRSGMDSEKR 1440
WD40-rpts                                                                                      

Query     1441 DSSWPKRAAAAASLTRTRSSTSMDGAGAISTTTTTTTTMTEEAFLETEVGRSKRLINFIKRRNSEITASSTSSTPNFSDG 1520
WD40-rpts                                                                                      

Query     1521 AIGEQPQPSHSQSSLLLQKLPPGQSQAQDSVEMAQMSPRKDNDKPSLNRRLWKQITKRRRTNSVSQIVAG 1590
WD40-rpts                                                                            

1 WD40-repeats found in QUERY=FBpp0289468 (Len=1590):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   432-477      3.02  239.21  0.03657       20.0%     -3.70

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  432-477    QEPPRPKANQQVKAIVTITETARIMRSSPTKGSGSGSATGTGSVGG

   WD40 Template    TGECLRTLSGHTSGVTSVS------FSPDGKRLVSGSEDGTIKVWD