Input parameters:

  Query = FBpp0289300 (Len=403)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0289300, Len=403):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSTEEHVWRAHVVRRLRERNRKECDNFKEIIEQNNRLIDHVAQLKADNLKISVENEQLRNAVSTGGTGSNVAIATLEKKL 80  
WD40-rpts                                                                                      

Query       81 LSQQEELTELHKRKGENSQMIVDLNQKVEQQRIIISEKEHSLVEQQTNNNRLRAEVQLLHSSLEELKKLNNTMLDEHTAL 160 
WD40-rpts                                                                                      

Query      161 QLAFSSLEEKLRGVQDENRRLLERLMQYKSKDADKLNEENESIIRKRSAKLKRDLEDAVREPSSSSNAASSPGAASLQRN 240 
WD40-rpts                                                                                      

Query      241 SSPAQFVGGLIGDEDFDEAAINGAMEAIGLDDNEYISARFTAGEIAENSRASIDTLKATGYLGQANPTKILMKFEAHENE 320 
WD40-rpts                            (__________________WD 1__________________)   (____________

Query      321 SHAVRWSPVERMVATGGADRKVKLWDIGKNSTEPRAVLSGSSAGINSVDFDSTGAYILGTSNDYGARVWTVMDNRLRVSK 400 
WD40-rpts      _____WD 2________________)     (_________________WD 3________________)          

Query      401 TNV 403 
WD40-rpts         

3 WD40-repeats found in QUERY=FBpp0289300 (Len=403):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   263-304      5.93  359.63  0.00089       10.0%     15.20
  WD 2:  Seg  3   308-346      9.35  501.04  1.1e-05       25.0%     48.96
  WD 3:  Seg  7   352-390      9.27  497.65  1.2e-05       32.5%     44.36

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  263-304    GAMEAIGLDDNEYISARFTAGEIAENSRASIDTLKATGYLGQ
   WD 2  308-346    -TKILMKF--EAHENESHAVRWSPVERMVATGGADRKVKLWD
   WD 3  352-390    -TEPRAVL--SGSSAGINSVDFDSTGAYILGTSNDYGARVWT

   WD40 Template    TGECLRTL--SGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD