Input parameters:

  Query = FBpp0271887 (Len=687)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0271887, Len=687):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASANHRGGGGRGGGGAVAGAGADGNAIVGLQIGSAWFQRKINLRPQHRGVHLVTEEILRQMPELAHFSVGLCHMQILHT 80  
WD40-rpts                                                                   (__________________

Query       81 SASLALNESWDPDVRDDMEMMLNKIVPEGLPYRHSCEGPDDMPAHVKACFLGSSLTIPITDGKLSLGTWQGVWLCEHRDQ 160 
WD40-rpts      ___________________WD 1_____________________________________)                   

Query      161 AGSRKLVITLTGCPREQARSPLSPVSPIASTRLILQKNLAKANLAQQRAAAVIAAGRGGLGGGHQDALAPPNIPGVETKT 240 
WD40-rpts                                                                                      

Query      241 GRLLLRQQLHLNLNLNVQETLRDGVDIDDVDEDVDEDEDLDLDLETVTTVPLNNEQLNAKVTTTTSSSSAASSALAKFNR 320 
WD40-rpts                                                                                      

Query      321 IIDSTLERPPVAVDYSGLPQLSSATLQQRFNLAYPELVNQQQQQQQQLQLQQHHQQHDATKQISSLQGNPRLDRGTDAVA 400 
WD40-rpts                                                                                      

Query      401 STPLTLQAPRTPATATEEQLDSGHPHDDADVVDHDDHPHHDEDNQTKRNDVHYLLKQLNSFSDIEEIEIVDMKQRGQRPP 480 
WD40-rpts                                                                                      

Query      481 MASSSLATMMPPPSPAPPASPSTQSHRLGPRFASSGDSSLVLPQHQFDDYLFESCHYLETNYFAATYRTAMVESSSHEFR 560 
WD40-rpts                                                                                      

Query      561 PSTNSSSNSFELHEMEPPSVICKAGVPPPLVSSHPGHPGHPDHPPPRYQFEYQAETRLTTSGVQTELTVESLAKMSNCSG 640 
WD40-rpts                                                                                      

Query      641 SSSSSSATRAPPFFRCCYTPIDRWRERRQQQKSSSASSSAAQPPKNV 687 
WD40-rpts                                                     

1 WD40-repeats found in QUERY=FBpp0271887 (Len=687):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    62-141      3.27  249.61  0.02662       30.0%      3.00

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   62-141    MPELAHFSVGLCHMQILHTSASLALNESWDPDVRDDMEMMLNKIVPEGLPYRHSCEGPDDMPAHVKACFLGSSLTIPITD

   WD40 Template    TGECLRTLSG-------HTSGVTSVSFSPDGK--------------------RLVSGSED-------------GTIKVWD