Input parameters:

  Query = FBpp0271773 (Len=523)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0271773, Len=523):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSGGTQGIRKLADKLFTPNEIRRFQAYKNRLSEKYLTVEGLKSTFKRPDLGKLFNRRVFSSNKEDCPEEPKVKECDPSWD 80  
WD40-rpts                                                                                      

Query       81 ELYPPGPPYEPYDTHYWYPDPEFMNKQQYIVWYPEGDEWKKRPNFKGKQIPPVDRTFRTKLINFGPAHPAAHGVLRMILE 160 
WD40-rpts                                                                                      

Query      161 LDNETVLNADPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSCMANELAYCLAVEKLLNVEVPRRAKYIRTMFSEIMRL 240 
WD40-rpts                                                                                      

Query      241 TNHTMAIGSSVLDCGAITPLFWLFEEREKLYEFSERASGARLHAAYIRPGGVASDIPLGFLHDLYQFINQFNERLDEVED 320 
WD40-rpts                                                                                      

Query      321 VVTDNRIWRMRNIGIGVISAHDALNYGCTGPVLRATGVKWDLRKQQPYDAYDEMDFDVVVGSNGDCYDRYLVRMREMRES 400 
WD40-rpts                  (_________________________________________WD 1______________________

Query      401 VNIIKQCIDAMPPGEIKVDDLKICPPQRSKMKEGMEDLIHHFKHFSQGFRVPPGQTYCAVESPKGEFGAFLISDGSSRPY 480 
WD40-rpts      ___________________)                                                            

Query      481 RCKIRPASYAHLALMAKMAPAHLLADVVAIIGSLDIVFGEIDR 523 
WD40-rpts                                                 

1 WD40-repeats found in QUERY=FBpp0271773 (Len=523):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   333-420      3.05  240.68  0.03497       30.0%     -0.10

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  333-420    IGIGVISAHDALNYGCTGPVLRATGVKWDLRKQQPYDAYDEMDFDVVVGSNGDCYDRYLVRMREMRESVNIIKQCIDAMPPGEIKVDD

   WD40 Template    TGECLRT--------LSGHTSGVTSVSF------------SPDGKRLVSGSED----------------------------GTIKVWD