Input parameters:

  Query = FBpp0112415 (Len=673)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0112415, Len=673):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MCGIFAYLNYLTPKSRQEVLDLLVTGLKRLEYRGYDSTGVAIDSPDNKNIVMVKRTGKVKVLEEAIQEHFSGREYSEPVL 80  
WD40-rpts                                                                                      

Query       81 THVGIAHTRWATHGVPCEKNSHPHRSDDENGFVVVHNGIITNYNDVKTFLSKRGYEFESDTDTEVFAKLVHHLWKTHPTY 160 
WD40-rpts                                                                                      

Query      161 SFRELVEQAILQVEGAFAIAVKSKYFPGECVASRRSSPLLVGIKTKTRLATDHIPILYGKDADSGKPQVLPRSESTSEFM 240 
WD40-rpts                                                                                      

Query      241 PLEEKEVEYFFASDASAVIEHTNRVIYLEDDDVAAVRDGTLSIHRLKKSLDDPHAREITTLKMEIQQIMKGNYDYFMQKE 320 
WD40-rpts                                                                                      

Query      321 IFEQPDSVVNTMRGRVRFDGNAIVLGGIKDYIPEIKRCRRLMLIGCGTSYHSAVATRQLLEELTELPVMVELASDFLDRN 400 
WD40-rpts                                                                                      

Query      401 TPIFRDDVCFFISQSGETADTLMALRYCKQRGALIVGITNTVGSSICRESHCGVHINAGPEIGVASTKAYTSQFISLVMF 480 
WD40-rpts                                                       (______________________________

Query      481 ALVMSEDRLSLQQRRLEILQALSKLADQIRDVLQLDSKVKELAKDLYQHKSLLIMGRGYNFATCLEGALKVKELTYMHSE 560 
WD40-rpts      _______________________________WD 1_____________________________________________

Query      561 GIMAGELKHGPLALVDDSMPVLMIVLRDPVYVKCMNALQQVTSRKGCPIIICEEGDEETKAFSSRHLEIPRTVDCLQGIL 640 
WD40-rpts      _______________)                                                                

Query      641 TVIPMQLLSYHIAVLRGCDVDCPRNLAKSVTVE 673 
WD40-rpts                                       

1 WD40-repeats found in QUERY=FBpp0112415 (Len=673):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 18   450-576      2.78  229.45  0.04920       22.5%      2.36

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  450-576    SHCGVHINAGPEIGVASTKAYTSQFISLVMFALVMSEDRLSLQQRRLEILQALSKLADQIRDVLQLDSKVKELAKDLYQHKSLLIMGRGYNFATCLEGALKVKELTYMHSEGIMAGELKHGPLALVD

   WD40 Template    TGECLRTLSGHTSGVTS----------------------VSF----------------------SPD---------------------GKR----------------------LVSGSEDGTIKVWD