Input parameters:

  Query = FBpp0111939 (Len=376)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0111939, Len=376):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGRRLPSFWLLLLQSVCFSQASFSELNNSDPKFSGPINNSTVPVGRDALLTCVVHDLVSFKVAWLRVDTQTILSIQNHVI 80  
WD40-rpts                                                                                      

Query       81 TKNHRISISHTEHRIWQLKIRDVQESDRGWYMCQINTDPMKSQMGYLDVVVPPDIVDYQTSQDVVRSTGQNVTLTCSATG 160 
WD40-rpts                                                                                    (_

Query      161 VPMPTITWRREEATPILISDDGDREVFSVEGQNLTLWQVQRSHMGAYLCIASNGVPPTVSKRVMLVVNFAPTIWTRYDTI 240 
WD40-rpts      ________________WD 1_________________)                                          

Query      241 YVGLGQKLTLECITESQPASVNFWLRDSQLLQGGSYESVSVDHVFRIVMRITLRPITKRDFGEYICRAKNAMGQTDRIIT 320 
WD40-rpts                                                                                      

Query      321 VHHKAKKHGQHSHQTSSRESQFIVIEEYIANMSDKSCSFQPLWIMFLCFVNKVSLL 376 
WD40-rpts                                                              

1 WD40-repeats found in QUERY=FBpp0111939 (Len=376):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 15   159-198      2.93  235.77  0.04061       27.5%     22.11

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  159-198    TGVPMPTITWRREEATPILISDDGDREVFSVEGQNLTLWQ

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD