Input parameters:

  Query = FBpp0110416 (Len=804)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0110416, Len=804):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLNADVITCSAVHLKFLIFGTFRGRVCIFDHQGNSVYSNLSASERHTHQVAVNNIDVDHKGEYVATCSDDGKVNITGLFS 80  
WD40-rpts                                         (__________________WD 1__________________)   

Query       81 SDNNHSLSFGKFIKVVSLEPDSKAHIKRFVVGDDKLILYERNLLKKLKPVELCSVEGSVLSICWHGNFIAWASHIGVRVY 160 
WD40-rpts                                                                                      

Query      161 DLNERCSLGLIKWEVPPQERLENFRCHLRWSNKHTLLIGWVDTIRVCVIRKRNSIEASTGNLPVYIVDPISTFQTTFYVC 240 
WD40-rpts                                                                                      

Query      241 GLAPLSAKQLVVLGFRKEKSSCFKALRPVLCVIEYKMNNSEEICTDSLTLRGFEEYTVNDYSLGGIIEENRFYIVAPKDI 320 
WD40-rpts                                                                                      

Query      321 VVASLIETDDRIEWLIKHSKFEEAMELISANGGNVPVLSVAKLYINHLLALKKYDDAAKLCLRMLGNDKVLWEEEVFKFV 400 
WD40-rpts                                                                                      

Query      401 KCQQLRSVSAYLPTSDECKLDPHVYEMVLYEFLKFDVCGFLNLIKEWPSHLYDGLAVINAIHDNFRKHYANQLLESLALL 480 
WD40-rpts                                                                                      

Query      481 YSYQGDFESALRMYLKLQNKDVFQLIRRYELYDVISKLIIPLIQLDRDCAFEILLDKKKIKTEIVVHQLEHNQEYLYWYL 560 
WD40-rpts                                                                                      

Query      561 DSLLKKDPSNVFQKKLISLYAIFDRNKLLPFLKRSKDYDIQEALVICKQENFYPEIVYLLGCMGGVEASEALNIIIHRIR 640 
WD40-rpts                                                                                      

Query      641 DIEMAIEFCKEHDDSDLWNALINEFSKHPEIVTKVLDGIVDYFSPAVVVGKIKMGQNIPNLRQSLIKMLRHYNLQGEILS 720 
WD40-rpts                                                                                      

Query      721 SAQQIQLNDYFEIHSEIVTTQRRGQQVSYEQLCSLCHRPVLMAGTHLYCIIRLECGHVYHKPCIQGELLKNCNECNLWKL 800 
WD40-rpts                                                                                      

Query      801 TVGK 804 
WD40-rpts          

1 WD40-repeats found in QUERY=FBpp0110416 (Len=804):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    36-77       3.78  270.71  0.01391       17.5%     39.36

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   36-77     VYSNLSASERHTHQVAVNNIDVDHKGEYVATCSDDGKVNITG

   WD40 Template    TGECL--RTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD