Input parameters:

  Query = FBpp0099609 (Len=366)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0099609, Len=366):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MALVCVEDFEKKAVGQLEKNALDYYRSGAGEQFTLGLNREAFRRLRLRPRCLRDVSRLDISTKIFGEQMQWPLGIAPTAM 80  
WD40-rpts                                                                                      

Query       81 QKMAHPDGEVGNARAAGKAGSIFILSTLSTTSLEDLAAGAPDTIKWFQLYIYKDRTITEKLVRRAEKANFKALVLTIDAP 160 
WD40-rpts                                                                                      

Query      161 IFGHRRADVRNNFSLPSHLSLANFQGVKATGVGNAAMGASGINEYVSSQFDPTITWKDIAWLKGITHLPIVVKGVLTAED 240 
WD40-rpts                                                                      (_______________

Query      241 AVLAQEFGCAGLIVSNHGARQIDTVPASIEALPEIVKAVGDNLVVMLDGGIMQGNDIFKALALGAKTVFVGRPAVWGLAY 320 
WD40-rpts      ______________WD 1_____________________________)                                

Query      321 NGQKGVEEMLSVLRKDFETTMALIGCQNLGDITSAMVVHESQYAKL 366 
WD40-rpts                                                    

1 WD40-repeats found in QUERY=FBpp0099609 (Len=366):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   225-288      3.36  253.36  0.02372       17.5%     22.91

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  225-288    ITHLPIVVKGVLTAEDAVLAQEFGCAGLIVSNHGARQIDTVPASIEALPEIVKAVGDNLVVMLD

   WD40 Template    TGECLRTLSGHTS----------GVTSVSFSPDGKRLVSGS--------------EDGTIKVWD