Input parameters:

  Query = FBpp0099608 (Len=400)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0099608, Len=400):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLAPNLSGFSASLGGASRGVVKHCIFPFSCYITAMALVCVEDFEKKAVGQLEKNALDYYRSGAGEQFTLGLNREAFRRLR 80  
WD40-rpts                                                                                      

Query       81 LRPRCLRDVSRLDISTKIFGEQMQWPLGIAPTAMQKMAHPDGEVGNARAAGKAGSIFILSTLSTTSLEDLAAGAPDTIKW 160 
WD40-rpts                                                                                      

Query      161 FQLYIYKDRTITEKLVRRAEKANFKALVLTIDAPIFGHRRADVRNNFSLPSHLSLANFQGVKATGVGNAAMGASGINEYV 240 
WD40-rpts                                                                                      

Query      241 SSQFDPTITWKDIAWLKGITHLPIVVKGVLTAEDAVLAQEFGCAGLIVSNHGARQIDTVPASIEALPEIVKAVGDNLVVM 320 
WD40-rpts                        (_____________________________WD 1____________________________

Query      321 LDGGIMQGNDIFKALALGAKTVFVGRPAVWGLAYNGQKGVEEMLSVLRKDFETTMALIGCQNLGDITSAMVVHESQYAKL 400 
WD40-rpts      _)                                                                              

1 WD40-repeats found in QUERY=FBpp0099608 (Len=400):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   259-322      3.35  252.89  0.02407       17.5%     22.67

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  259-322    ITHLPIVVKGVLTAEDAVLAQEFGCAGLIVSNHGARQIDTVPASIEALPEIVKAVGDNLVVMLD

   WD40 Template    TGECLRTLSGHTS----------GVTSVSFSPDGKRLVSGS--------------EDGTIKVWD