Input parameters:

  Query = FBpp0099523 (Len=396)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0099523, Len=396):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAPEEEEPEEEVARDSLCTRSDSVCQAVQRQQLQCQVHRIETADGYRLSLHRIPAPQNRWCPQQLRPFLLMHGLLGSAGD 80  
WD40-rpts                                                                                      

Query       81 FVSGGRGRSLALELHARCFDVWLANARGTTHSRGHRTLQTSDARFWRFSWHEIGIYDLPAIVDYVLARTNRRQLHYVGHS 160 
WD40-rpts                                                                          (___________

Query      161 QGTTVLLVLLSQRPEYNARFANAALLAPVAFLQHLSSPPLRLLASDSSMATLLLNKLGLHELLPASALTQVGGQFFCTAS 240 
WD40-rpts      ______________________________________________________________WD 1______________

Query      241 RPTYALCTLFTSVYVGFSDYPLDRSILPRILETTPAGISRGQLQHFGQLINSGKFQQYDYRSPRLNTLRYGRTTPPSYQL 320 
WD40-rpts      __________________________________________________________)                     

Query      321 ANVRLQLQIFHGSRDTLSSLADVQRLVRELRNSVTQMYQVPGYNHIDFLFASSAPQVVFQRIIQQAWQLDMALAAL 396 
WD40-rpts                                                                                  

1 WD40-repeats found in QUERY=FBpp0099523 (Len=396):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   149-299      2.99  238.15  0.03777       25.0%      7.05

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  149-299    TNRRQLHYVGHSQGTTVLLVLLSQRPEYNARFANAALLAPVAFLQHLSSPPLRLLASDSSMATLLLNKLGLHELLPASALTQVGGQFFCTASRPTYALCTLFTSVYVGFSDYPLDRSILPRILETTPAGISRGQLQHFGQLINSGKFQQYD

   WD40 Template    TGECLRTLSGHT--------------------------------SGVTS--------V--------------SFSP-------------DGKR---------------------LVS-----------GSE------------DGTIKVWD