Input parameters:

  Query = FBpp0099384 (Len=777)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0099384, Len=777):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDAAADGVPPTAPAATATTANSDLDLAARRRLFISQPSTLATRRQQAVCVRRAHKMYGSSKNPNVVLDGLNMTVPKGSIY 80  
WD40-rpts                                                                                      

Query       81 GLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGVPGPRIGYMPQEIALYGEFTMRETLIYFGIISAMSKGDI 160 
WD40-rpts                                                                                      

Query      161 EDRTEFLLKLLNLPNASKFVKNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITT 240 
WD40-rpts                                                                            (_________

Query      241 HYIDECAQAHMIGLLRGGKMLAEESPDYLRQQYNADSLEDVFLKLSVLQNMGKRRRSSIAQEIVEQVTVPAISNPALDMS 320 
WD40-rpts      ______________________WD 1______________________________)                       

Query      321 DEQHAAEISGEFGDNISMSSAARDPISTTAPAAPPLPPPQEIPTSFWYNLHVMQSHHLHALIWKNFLWMMRNVGVMLFIV 400 
WD40-rpts                                                                                      

Query      401 GLPVVQILLFCYAIGHDPTGLKLAVANHEMSGEMIMEQFCPVHTGCNQTMLSCRYLDMLVKNKSMVVQYVTDDEMAYEEV 480 
WD40-rpts                                                                                      

Query      481 RKGRAWAALVIQPNYTASLMERVEDGRYAEDGTIESSDLAVRMDWSNQQISQLLYRDLQYTFFNFVGDMLSDCDVNPKLG 560 
WD40-rpts                                                                                      

Query      561 RVPVDFQHPVYGYRNPNFTDFAAPGVILTIIFFLAVAVTSGAMLIDRNEGMLERCLVAGITGPEILLSQVVTQFTVMLSQ 640 
WD40-rpts                                                                                      

Query      641 TTFVLIVSFYFFELTLVGNIWLVVALCILNGLCGMSFGFVISCAVDTERTATYVAMGSFLPIVMLCGIIWPIEGMFPLLQ 720 
WD40-rpts                                                                                      

Query      721 FFTAFLPLTKPTESMRSILQRGWGIDNPVVYNGFISISSWVLVFLVLTILLLKFKKG 777 
WD40-rpts                                                               

1 WD40-repeats found in QUERY=FBpp0099384 (Len=777):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  9   231-297      2.79  229.82  0.04864       17.5%     24.28

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  231-297    NGHTTVIITTHYIDECAQAHMIGLLRGGKMLAEESPDYLRQQYNADSLEDVFLKLSVLQNMGKRRRS

   WD40 Template    TGECLRTLSGHTSG----VTSVSFSPDGKRLVSGS---------EDG--------------TIKVWD