Input parameters:

  Query = FBpp0089085 (Len=504)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0089085, Len=504):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAKMPETTFADLSLADKTAVKKSSIEARRFSDVSTCSFSSTCFTGSSDEEDVSPKDNHQRNSAGGTDFCVKSISKSAFGR 80  
WD40-rpts                                                                                      

Query       81 REIEIAESEMPGIMTLRKRAKDEKPLKGANIVGCTHVNAQSAVLIETLVQLGATVRWAACNIYSTQNAVAAALAEAGIPI 160 
WD40-rpts                                                                                 (____

Query      161 FAWRGETEEEFWWCLDRAIYSDGWQPNLILDDGGDATHLMLKKYPDYFKAIRGIVEESVTGVHRLYMLSKGGKLTVPAIN 240 
WD40-rpts      _____________________________________WD 1_______________________________________

Query      241 VNDSVTKNKFDTFYTCRDSILDSLKRTTDIMFGGKQVVICGYGDVGKGCAQSLKGQGCIVYVTEVDPICALQAAMDGFRV 320 
WD40-rpts      __)                                                                             

Query      321 VRLNEVIRTVDVVVTATGNKNVITRDHMNRMKNGCILCNMGHSCSEIDVNGLHTPELTWERVRSQVDHIRWPDGRMIILL 400 
WD40-rpts                                                                                      

Query      401 AEGRLVNLSCSTISSFVVSVASSTQALALIELFSAPGRYKSDVYLLPKKMDEYVASLHLATFDAHLTELTDEQSKFMGLN 480 
WD40-rpts                                                                                      

Query      481 KAGPFKANYYRLVTLLSLSILHSS 504 
WD40-rpts                              

1 WD40-repeats found in QUERY=FBpp0089085 (Len=504):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   156-243      3.17  245.73  0.02998       25.0%     23.31

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  156-243    AGIPIFAWRGETEEEFWWCLDRAIYSDGWQPNLILDDGGDATHLMLKKYPDYFKAIRGIVEESVTGVHRLYMLSKGGKLTVPAINVND

   WD40 Template    TGECLRTLSGHT--------------SGVTSVSFSPDGK--------------RLVSGSEDGT--------------------IKVWD