Input parameters:

  Query = FBpp0088514 (Len=345)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0088514, Len=345):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MELIETASTPGDSETEIAIPEAAFDSFKMPMLPSQFHLENSMSPGYAIKHSLLGHSGCVTGLKFSSNGENLVSSSGDRLL 80  
WD40-rpts                                                          (_____________WD 1__________

Query       81 KLWDLSATRCIQSLAGHGDGVNDVAWSAAGLIASCSDDMTVRLWDARSKLCVKVLEGHSRYSFSCCFNPQANLLASTSFD 160 
WD40-rpts      ___)   (________________WD 2________________)   (_________________WD 3__________

Query      161 ETVRLWDVRTGKTLKIVHAHQDPITSVDFHRDGNIFVTSSYDGLVRLWDSSTGHVLKTLVDVDNIPVGYVKFSPNGRYIL 240 
WD40-rpts      ______)   (_________________WD 4________________)   (_________________WD 5______

Query      241 SSTLNNTLRLWNYKKPKCMRTYRGHLNEFYCSNSNFSTTGGIWIVSGSEDNTLCIWNLQTRELVQKISTEGDQILSTHCH 320 
WD40-rpts      ___________)   (__________________WD 6__________________)   (__________________W

Query      321 PTANVIASGALQNSYAIKIWKSSEK 345 
WD40-rpts      D 7_________________)    

7 WD40-repeats found in QUERY=FBpp0088514 (Len=345):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    53-84       8.28  456.67  4.4e-05       37.5%     44.93
  WD 2:  Seg  5    88-125      9.14  492.25  1.4e-05       37.5%     54.63
  WD 3:  Seg  9   129-167     10.13  533.24  4.0e-06       35.0%     56.58
  WD 4:  Seg 13   171-209     10.51  548.71  2.5e-06       37.5%     57.56
  WD 5:  Seg 17   213-252      8.55  467.64  3.1e-05       32.5%     56.01
  WD 6:  Seg 21   256-297      7.78  436.03  8.3e-05       40.0%     56.77
  WD 7:  Seg 25   301-341      7.86  439.22  7.5e-05       22.5%     56.08

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   53-84     -------LGHSG-C--VTGLKFSSNGE-NLVSSSGDRL--LKLWD
   WD 2   88-125    TRCIQSLAGHGD-G--VNDVAWSAAG--LIASCSDDMT--VRLWD
   WD 3  129-167    KLCVKVLEGHSR-Y--SFSCCFNPQAN-LLASTSFDET--VRLWD
   WD 4  171-209    GKTLKIVHAHQD-P--ITSVDFHRDGN-IFVTSSYDGL--VRLWD
   WD 5  213-252    GHVLKTLVDVDNIP--VGYVKFSPNGR-YILSSTLNNT--LRLWN
   WD 6  256-297    PKCMRTYRGHLN-EFYCSNSNFSTTGGIWIVSGSEDNT--LCIWN
   WD 7  301-341    RELVQKISTEGD-Q--ILSTHCHPTAN-VIASGALQNSYAIKIWK

   WD40 Template    GECLRTLSGHTS-G--VTSVSFSPDGK-RLVSGSEDGT--IKVWD