Input parameters:

  Query = FBpp0087645 (Len=521)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0087645, Len=521):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MQRKEANPFQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILERLSEEPVSHFALV 80  
WD40-rpts                                                (_____________________________________

Query       81 LTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEAD 160 
WD40-rpts      _____WD 1__________________________________________)                            

Query      161 RMLNGDFDESLSIIERCLPKTRQNLFFSATMKDFIKESSIFPIASDCFEWSQDSDVATVETLDQRYLLCADYDRDMVLIE 240 
WD40-rpts                                                                                      

Query      241 ALRKYREENENANVMIFTNTKKYCQLLSMTLKNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARGLDIPSV 320 
WD40-rpts                                                                                      

Query      321 ELVMNHMLPRTPKEYIHRVGRTARAGRKGMSISIFRFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQVNVTRRESE 400 
WD40-rpts                                                                                      

Query      401 MQLDNNDFDERAQNYRRKTWIMEGKDPDQMEALYRKKQKDKLREIRRKRKLQHAEPAASEEGKALLQDERFKSVDSARFE 480 
WD40-rpts                                                                                      

Query      481 KKGKGRSRATQEDTPTKPLKRLNKEKPVAQKGRADVKKDKA 521 
WD40-rpts                                               

1 WD40-repeats found in QUERY=FBpp0087645 (Len=521):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    43-132      2.93  235.49  0.04096       22.5%     35.71

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   43-132    AGQDCIGAAKTGSGKTFAFALPILERLSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAM

   WD40 Template    TGECLRTLSGHTS-------------------GVTSVSFSPD--------------------GKRLVSGSEDG-----------TIKVWD