Input parameters:

  Query = FBpp0087323 (Len=459)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0087323, Len=459):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAEEGPPEPSIDFVPALCFVPRGVAKDRPDKIVLTQAELARIIGDTQQELDEESDDDAEEGENAEEDQNDMDVDDHADAN 80  
WD40-rpts      (_____________________________WD 1____________________________)                 

Query       81 SENRDPQDEFQFQEYDNEANANVTSLANIVDAGEQIPDEDEDSEAEDEVIKPSDNLILVGHVQDDAASMEVWVFNQEEEA 160 
WD40-rpts                                      (_________________WD 2________________)  (______

Query      161 LYTHHDFLLPSFPLCIEWMNHDAGSEKAGNMCAIGCMDPIITVWDLDIQDAIEPTFKLGSKGSRKQNKEQYGHKDAVLDL 240 
WD40-rpts      _________________WD 3_______________________)                  (________________

Query      241 SWNTNFEHILASGSVDQTVILWDMDEGQPHTTITAFGKQIQSLEFHPQEAQSILTGCADGYVRLFDCRDAEGVNSSSIEW 320 
WD40-rpts      _WD 4_________________)   (_________________WD 5_________________)(_____________

Query      321 KVDGEVEKVLWHPTQTDYFIVGTNDGTLHYADKRSPGQLLWSVKAHNEEISGVCFNNQKPNLLTSTSTEGTLKVWNFDGT 400 
WD40-rpts      _______WD 6____________________)    (_________________WD 7_________________)    

Query      401 EAKHVYEHEFNMGRLQCMRQCPEDPYTLAFGGEKPPRCAIFNIKNSIAVRRTFGIPDAE 459 
WD40-rpts       (__________________WD 8_________________)                 

8 WD40-repeats found in QUERY=FBpp0087323 (Len=459):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-63       4.66  307.30  0.00449       20.0%      0.22
  WD 2:  Seg  3   113-151      7.01  404.33  0.00022       17.5%     38.90
  WD 3:  Seg  6   154-205      5.92  359.03  0.00090       22.5%     38.33
  WD 4:  Seg  9   224-263      7.05  405.82  0.00021       30.0%     38.18
  WD 5:  Seg 12   267-306      8.17  452.20  5.0e-05       22.5%     55.25
  WD 6:  Seg 16   307-352      5.84  355.75  0.00100       20.0%     46.09
  WD 7:  Seg 19   357-396      8.35  459.72  4.0e-05       32.5%     52.05
  WD 8:  Seg 23   402-442      5.10  325.50  0.00255        5.0%     48.25

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-63     MAE------EGPPEPSIDFVP------------ALCFVP-RGVAKDRPDKIVL--TQAELARIIGDTQQELDEESDDDAEEGEN
   WD 2  113-151    -GEQ-----IPDEDEDSEAED------------EVIKPS-DNLI--------L--V----------------GHVQDDAASMEV
   WD 3  154-205    FNQE-----EEALYTHHDFLLPSFPLCIEWMNHDAGSEK-AGNM--------C--A----------------IGCMDPIITVWD
   WD 4  224-263    -RKQ-----NKEQYGHKDAVL------------DLSWNT-NFEH-------IL--A----------------SGSVDQTVILWD
   WD 5  267-306    -GQP-----HTTITAFGKQIQ------------SLEFHPQEAQS--------I--L----------------TGCADGYVRLFD
   WD 6  307-352    CRDAEGVNSSSIEWKVDGEVE------------KVLWHPTQTDY--------F--I----------------VGTNDGTLHYAD
   WD 7  357-396    -GQL-----LWSVKAHNEEIS------------GVCFNN-QKPN-------LL--T----------------STSTEGTLKVWN
   WD 8  402-442    -AKH-----VYEHEFNMGRLQ------------CMRQCP-EDPY--------TLAF----------------GGEKPPRCAIFN

   WD40 Template    TGEC-----LRTLSGHTSGVT------------SVSFSP-DGKR--------L--V----------------SGSEDGTIKVWD