Input parameters:

  Query = FBpp0086732 (Len=895)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0086732, Len=895):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSFLRSALRYAHTNGYTGLLYTPRGEFIITCGTDGDIRHWTCISDDDPRSSCLGEFVMCIAHTGTRLLASTDRNTIHAYT 80  
WD40-rpts       (_________________WD 1_________________)       (_____________WD 2_____________)

Query       81 FPEMDSDGILMRFTAPATCLKVSGGYTAAGSEDTTIKVLKGDTAGNETVLEGHTGPILALDLFAERKLLVSVAGDGQLKV 160 
WD40-rpts      (_________________WD 3_________________)   (_________________WD 4_______________

Query      161 WNFEEGKELKTIGGLPKVNSFESASLYGTPHFEPQSGELLAYAVDNEIVVLNTANWEVAFKLRDDSVSSNYSCCQFSPNG 240 
WD40-rpts      _)          (_________________WD 5_________________)   (__________________WD 6__

Query      241 ERLAAGTTKGEVSIFDVKKRKAVTVEIPPSDCNAITCLAWNLSGEVEVAFCDATGQLGTVFLGDAVDTGNGDGLVDDQAE 320 
WD40-rpts      _______________)(___________________WD 7__________________)                     

Query      321 LLGDDYEFEAGDDVDTAADDGDGVSLEQLKRKVMNFADPVDHDDASNQSLDSSSRTVPAPVAPQIKLFKQQTAFQPSATP 400 
WD40-rpts                                                                                      

Query      401 ADLEHRYMAWNDVGIVTAHVEPSGDSSIDVEFHDASIHHALHISNYNQHNLASVSSGALALASNESSKLVVIALAAAGNK 480 
WD40-rpts                                       (__________________WD 8_________________)      

Query      481 EWSLSLPDCESAEAVVATRFLVAVATSSSFLRIFTVMGTQREVLTIPGPMVAIAGHEHSLMVVYHSSAPSQTQQHLAAML 560 
WD40-rpts                                                                                      

Query      561 VNINGLSLRQEYLPVPLTPGRQLTWFGYSDTGSPSIADNMGLLQLYRRSSNAWFPICDTMKQSTSVSHNFFVVAVSEKRQ 640 
WD40-rpts                                                                                      

Query      641 IVQAVLCRGTSYPMTNPRPMLQELRMQIPLCDVEVEKSELEDALLRSSLMQMDGAEKMQKETAIKLFALACSSECETRAR 720 
WD40-rpts                                                                                      

Query      721 ELIESIACTDLLQLAVKYATKRGRIHLSDRLCELLPQLEAVQEARKQQTLLGASGIAATIVLPMTPTSASQSGPKPKAIE 800 
WD40-rpts                                                                                      

Query      801 LSSAKRGTLKRLVNSPNMFKAAAASAASRPSTPDITPSPLDTQENIFGESESEVPMGKATDHRSPLNSVNPFAMKRKLGD 880 
WD40-rpts                                                                                      

Query      881 TGVIFGSEKLKLAKK 895 
WD40-rpts                     

8 WD40-repeats found in QUERY=FBpp0086732 (Len=895):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-41       7.52  425.13  0.00012       25.0%     44.50
  WD 2:  Seg  4    49-80       4.09  283.81  0.00928       15.0%     44.89
  WD 3:  Seg  7    81-120      5.70  350.09  0.00119       25.0%     44.87
  WD 4:  Seg 11   124-162      8.68  473.15  2.6e-05       32.5%     57.75
  WD 5:  Seg 16   173-212      6.80  395.52  0.00029       20.0%     42.03
  WD 6:  Seg 19   216-256      7.19  411.67  0.00018       30.0%     58.99
  WD 7:  Seg 23   257-299      4.16  286.38  0.00858       12.5%     49.07
  WD 8:  Seg 30   434-474      3.06  241.21  0.03441       12.5%     31.38

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-41     SFL----RSALRY-AH--TNGYTGLLYTPRGEFIITCGTDGDIRHWT
   WD 2   49-80     ------------R-SS--CLGEFVMCIAHTGTRLLASTDRNTIHAYT
   WD 3   81-120    FPE----MDSDGI-LM--RFTAPATCLKVSGGYTAAGSEDTTIKVLK
   WD 4  124-162    -AG----NETVLE-GH--TGPILALDLFAERKLLVSVAGDGQLKVWN
   WD 5  173-212    GGL----PKVNSF-ES--ASLYGTPHFEPQSGELLAYAVDNEIVVLN
   WD 6  216-256    -WE----VAFKLR-DDSVSSNYSCCQFSPNGERLAAGTTKGEVSIFD
   WD 7  257-299    VKKRKAVTVEIPP-SD--CNAITCLAWNLSGEVEVAFC-DATGQLGT
   WD 8  434-474    DAS----IHHALHISN--YNQHNLASVSSGALALASNESSKLVVIAL

   WD40 Template    TGE----CLRTLS-GH--TSGVTSVSFSPDGKRLVSGSEDGTIKVWD