Input parameters:

  Query = FBpp0086590 (Len=335)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0086590, Len=335):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFD 80  
WD40-rpts      (__________________WD 1__________________)      (_________________WD 2__________

Query       81 ATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK 160 
WD40-rpts      ______)(___________________WD 3___________________)      (_________________WD 4_

Query      161 DILASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATPDQQTV 240 
WD40-rpts      _______________)       (_________________WD 5________________)                  

Query      241 WKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLI 320 
WD40-rpts      (_________________WD 6_________________)   (______________________WD 7__________

Query      321 SCSDDGTIKIWKVTE 335 
WD40-rpts      ___________)   

7 WD40-repeats found in QUERY=FBpp0086590 (Len=335):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-42       9.66  513.62  7.4e-06       32.5%     55.22
  WD 2:  Seg  5    49-87       8.79  477.82  2.3e-05       27.5%     48.75
  WD 3:  Seg  9    88-131      9.77  518.38  6.4e-06       40.0%     56.20
  WD 4:  Seg 13   138-176      9.22  495.69  1.3e-05       37.5%     53.33
  WD 5:  Seg 17   184-222     10.56  550.87  2.3e-06       50.0%     54.52
  WD 6:  Seg 21   241-280      6.85  397.66  0.00027       22.5%     57.86
  WD 7:  Seg 24   284-332      7.67  431.41  9.5e-05       35.0%     38.53

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-42     MG----RLILEHTL---------QG-HKGRIWGVAWHP-KGNVFASCGEDKAIRIWS
   WD 2   49-87     -S----T--KTILS---------DG-HKRTIREIRWSP-CGQYLASASFDATTAIWS
   WD 3   88-131    KSSGEFE--CNATL---------EG-HENEVKSVSWSR-SGGLLATCSRDKSVWIWE
   WD 4  138-176    -F----E--CAAVL---------NP-HTQDVKRVVWHP-TKDILASASYDNTIKMFA
   WD 5  184-222    -W----D--CTATL---------TS-HTSTVWGIDFDA-DGERLVSCSDDTTIKIWR
   WD 6  241-280    -W----K--CVCTV---------SGQHSRAIYDVSWCK-LTGLIATACGDDGIRIFK
   WD 7  284-332    -D----S--KPDEPTFEQITAEEGA-HDQDVNSVQWNPVVAGQLISCSDDGTIKIWK

   WD40 Template    TG----E--CLRTL---------SG-HTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD