Input parameters:

  Query = FBpp0085983 (Len=234)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0085983, Len=234):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MQLFTRVILLAVTIFSVSAVPRFGEDIGLEEVLFRMVLGEAEGRGLTPAAQTCANIYLNTTQKNGDKLANATNACEEAAN 80  
WD40-rpts                             (______________________________________________________WD

Query       81 RTNVAYTQTSNSTINQIRLQLLTLEQNLQLCRNETDSAIFLNCTVSTFDKNLQLLDTSNSQAYRAQSQFVSNATQMNAEK 160 
WD40-rpts       1_____________________________________________________)                        

Query      161 SNCISSAVSEAKVQSIQAANDFNSCLDKIPAQREVPQKMEQQLREQQQEKPTQITKEQVSAKPQLMFEDLPLTN 234 
WD40-rpts                                                                                

1 WD40-repeats found in QUERY=FBpp0085983 (Len=234):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    24-136      2.96  237.03  0.03908       25.0%      6.66

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   24-136    GEDIGLEEVLFRMVLGEAEGRGLTPAAQTCANIYLNTTQKNGDKLANATNACEEAANRTNVAYTQTSNSTINQIRLQLLTLEQNLQLCRNETDSAIFLNCTVSTFDKNLQLLD

   WD40 Template    GECL----------------RTLS-----------GHTSGV----------------------TSVSF----------------------SPDGKRLVSGS---EDGTIKVWD