Input parameters:

  Query = FBpp0084909 (Len=776)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0084909, Len=776):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPDSVEDTSTISLRICLEGHANALALNKDNNQIALAGRSLLKVYSINSNGFTESCNMRGKNQNLSYSANDVAWSTLDSNL 80  
WD40-rpts               (_______________WD 1_______________)          (_________________WD 2___

Query       81 LATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISGSQDGTIKCFDIRSDKSINTYFCNSESVRDV 160 
WD40-rpts      _____________)      (_________________WD 3_________________)   (________________

Query      161 KFSPHTQNIFSAVSENGTVQLWDMRKWDKCMVQFTAHYGPVYTCDWHPTRNWLATGSRDKQIKVWNMDGRPGLEHTIHTI 240 
WD40-rpts      _WD 4_________________)     (________________WD 5________________)   (__________

Query      241 AVVGRVKWRPERTYHIASCALVVDYSVHVWDIRRPYIPFASFNEHTNVTTGIAWQGSDSHCLLSISKDSTIYKHAFKDAT 320 
WD40-rpts      ________WD 6__________________)        (_______________WD 7_______________)     

Query      321 RPALKANAQGASLGRFGDISFANKIKEYEPKTSGASNTKSSSFIRRKTNVAGSIQFHLDHSKMYKFMVNDTFSGYPLSES 400 
WD40-rpts                                           (_________________WD 8________________)    

Query      401 VSRPTQEHESFIGCARELVISGKKLSELCEHNAEVSKKYGKHNATTLWNFIKLFYGSNHFEPPFEHRSSFSNQKNPMNSR 480 
WD40-rpts                                            (_______________________WD 9______________

Query      481 RATQVASDWPQQRTELGQDLNGNTPETAHEIDVANVDDDTLGSSGVEHPPTSSVILSETQIISEITFDNFELLRNGFIYV 560 
WD40-rpts      _________)                                                                      

Query      561 GPTECPKALAFPALHHDVQAARPQLDLKASDHEKSPPPHVPTVLKVSHVPPIPMWEPHKFVSDALMLMNDVGDVQTALTV 640 
WD40-rpts                                                                                      

Query      641 LIALGEARKLLPIDDALVEHWFYTYVDQLHRYELWNEACEVINRSWLRSVQQLNQHSTAMHTNCGECGRPMGGKVGWYCD 720 
WD40-rpts                                                                                      

Query      721 KCKSMQSAKCCVCGLIVRGVYAWCQGCSHGGHIEHLQKYFAKHSKCPKCGHLCAYS 776 
WD40-rpts                                                              

9 WD40-repeats found in QUERY=FBpp0084909 (Len=776):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    10-45       4.08  283.09  0.00950       17.5%     46.45
  WD 2:  Seg  6    56-94       6.29  374.30  0.00056       20.0%     40.22
  WD 3:  Seg  9   101-140      7.64  430.10  9.9e-05       37.5%     53.03
  WD 4:  Seg 13   144-183      7.76  435.02  8.5e-05       30.0%     52.38
  WD 5:  Seg 17   189-226      9.03  487.84  1.7e-05       30.0%     52.63
  WD 6:  Seg 21   230-271      6.45  381.25  0.00045       20.0%     52.03
  WD 7:  Seg 25   280-315      6.22  371.42  0.00061       25.0%     49.13
  WD 8:  Seg 29   358-396      5.54  343.34  0.00147       12.5%     34.40
  WD 9:  Seg 33   439-490      6.13  367.68  0.00069       17.5%     -0.72

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   10-45     TISLRICLEG------------H---ANALAL-N-K-DNNQI-ALAG----RSLLKVYS
   WD 2   56-94     N--MRGKNQN------------LSYSANDVAW-S-TLDSNLL-ATAAT---NGVVSVWD
   WD 3  101-140    -QKQLLVYNE------------HERTAHTVTFHS-S-EPNIL-ISGSQ---DGTIKCFD
   WD 4  144-183    -DKSINTYFC------------NSESVRDVKF-S-P-HTQNIFSAVSE---NGTVQLWD
   WD 5  189-226    --KCMVQFTA------------HYGPVYTCDW-H-P-TRNWL-ATGSR---DKQIKVWN
   WD 6  230-271    -RPGLEHTIH------------TIAVVGRVKW-R-P-ERTYH-IASCALVVDYSVHVWD
   WD 7  280-315    -----ASFNE------------HTNVTTGIAW-QGS-DSHCL-LSISK---DSTIYKHA
   WD 8  358-396    -TKSSSFIRR------------KTNVAGSIQF-H-L-DHSKM-YKFMV---NDTFSGYP
   WD 9  439-490    YGKHNATTLWNFIKLFYGSNHFEPPFEHRSSF-S-N-QKNPM-NSRRA---TQVASDWP

   WD40 Template    TGECLRTLSG------------HTSGVTSVSF-S-P-DGKRL-VSGSE---DGTIKVWD