Input parameters:

  Query = FBpp0084187 (Len=320)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0084187, Len=320):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRSVIEPDHSIQLNEAIYCYDICTNDFAYNLIAVAFRKHLSLLLVGLPEESGEFGYTRLQDMDLGEKEQRSVSALAFSPD 80  
WD40-rpts                   (___________________WD 1__________________)  (____________________W

Query       81 TSLNCTPNNVTLCAANGSQLKLYRTDLGQFTSLQVLRGHGDYVNDVSWVCDGELLASVSDDFTCRFWTTTGGGENVITFG 160 
WD40-rpts      D 2____________________)     (_________________WD 3________________)   (________

Query      161 LSSAGMSVKSHPEDPNKVLVAEKKGIIHLYNVTLKQTVISVESPKFPLMSADWAHSNRLFITSLAGGDVVTWDLNRPYVP 240 
WD40-rpts      _________WD 4_________________)   (_________________WD 5________________)(______

Query      241 ADVKQVHEDCGRVVRFAPGSSEMVIAMVIGLTLKVFAAKSTVPLLEASLKSYGGMAWHQRLPYISAVSDRKLLFWKVQMK 320 
WD40-rpts      _____________WD 6___________________)(_________________WD 7________________)    

7 WD40-repeats found in QUERY=FBpp0084187 (Len=320):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    14-56       6.80  395.74  0.00029       10.0%     40.60
  WD 2:  Seg  5    59-104      7.00  403.97  0.00022       15.0%     34.37
  WD 3:  Seg  9   110-148      9.59  510.98  8.1e-06       37.5%     52.17
  WD 4:  Seg 13   152-191      7.79  436.40  8.2e-05       22.5%     56.17
  WD 5:  Seg 17   195-233      8.81  478.55  2.2e-05       10.0%     58.81
  WD 6:  Seg 21   234-277      6.20  370.65  0.00063       17.5%     45.92
  WD 7:  Seg 24   278-316      7.26  414.36  0.00016       10.0%     50.84

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   14-56     NEA---IYCYDICTNDFAYNLIAVAFRK-HL-SLL-------LVGLPEESGEFGY
   WD 2   59-104    -LQ---DMD---LGEKEQRSVSALAFSP-DT-SLNCTPNNVTLCAANGSQLKLYR
   WD 3  110-148    -FT---SLQ---VLRGHGDYVNDVSWVC-DG-ELL-------ASVSDDFTCRFWT
   WD 4  152-191    -GG---ENV---ITFGLSSAGMSVKSHPEDP-NKV-------LVAEKKGIIHLYN
   WD 5  195-233    -KQ---TVI---SVESPKFPLMSADWAH-SN-RLF-------ITSLAGGDVVTWD
   WD 6  234-277    LNRPYVPAD---VKQVHEDCGRVVRFAP-GSSEMV-------IAMVIGLTLKVFA
   WD 7  278-316    AKS---TVP---LLEASLKSYGGMAWHQ-RL-P-Y-------ISAVSDRKLLFWK

   WD40 Template    TGE---CLR---TLSGHTSGVTSVSFSP-DG-KRL-------VSGSEDGTIKVWD