Input parameters:

  Query = FBpp0083450 (Len=522)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0083450, Len=522):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFRLLNALLIAIVLVAHPAWSAPECGRTPEECREHRMHPDMPEPERHGKAFRVVDGEDTNAYWRQQGVQFVQQKLASEPN 80  
WD40-rpts                                                                                      

Query       81 KRQAKNVILFLGDGMGVTTTSAARNLLGGEEKSLSFENFPFTGLSKTYSVDKIVPDSACTATAYLCGVKGQEGTIGVNGQ 160 
WD40-rpts                                (________________________WD 1_______________________) 

Query      161 VPRTDCKVMLDESTHVDSIAKWAMEAGKWAGLVTTTRVTHASPSGVYAHIAERDWENDAEVATDCGAGSGINDIAYQLAR 240 
WD40-rpts                                                                                      

Query      241 GEVGSKLKVIMGGGRKHFVDSSLESWGKRTDGLNLIDEFKSASENNVYVTTAAELAAVDVTKTDRLLGLFNDDHLQYLME 320 
WD40-rpts                                                                                      

Query      321 TTTESSQPTLEQMTRKAIEYMSQNEQGYFLFIEGGRIDQAHHINQARMALNETIEFSKAIAAAQELTSEDDTLLVVTADH 400 
WD40-rpts                                                                                      

Query      401 SHVFTYAGYSYRGSDVFGKTPVNGHDGKPYMVLSYANGPSYENFYDAETMERKDPTTVVKGDHDDEFPSGVPIDMDSHGG 480 
WD40-rpts                                                                                      

Query      481 DDVPVYALGPWAHLFTGVYEQSTIPHMMAYASCLGDGHTMCK 522 
WD40-rpts                                                

1 WD40-repeats found in QUERY=FBpp0083450 (Len=522):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   107-159      3.02  239.31  0.03646       27.5%      2.49

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  107-159    LGGEEKSLSFENFPFTGLSKTYSVDKIVPDSACTATAYLCGVKGQEGTIGVNG

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGS-------------EDGTIKVWD