Input parameters:

  Query = FBpp0083185 (Len=1638)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0083185, Len=1638):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEAKPVPAPQPRPRAMAEPLHIQRLEAALNMRPFMNMAKRSLRKPLSSDEETDDEHVVKREHDVQDSDDSSTVGVVRMKQ 80  
WD40-rpts                                                                                      

Query       81 SSKRKSRLLASKEERQSVKAQLYNFNDLTSDREWLYDLLLSDTESDDPTITEDEYVQQLLREHVREQRQRKNYYKKAANA 160 
WD40-rpts                                                                                      

Query      161 QYAYYGSGLLSNHDIFAERQLATAGVRKRRRRTKQEILMARLAEAQAGPKPPKQRRRGRKKRDNMGSPESGEVPPSELGK 240 
WD40-rpts                                                                                      

Query      241 YTFGDTLPNNEDDDEDGGEVDYKRELASLALDYPEEEEIEEEVDVEGGTEGQVTKVRRKRKNPAALAARRRRIWQIMSKK 320 
WD40-rpts                                                                                      

Query      321 ESGRLQRIKSNNHKEMLANCKRVAGMCAKVVRQRAINSQRIMKETVWRAKRLTREMLAYWKRYERVERDQRRKQEREAEE 400 
WD40-rpts                                                                                      

Query      401 QRKQDVELIEVKRQQRKLNFLITQTELYAHFMSKKLGQGSEEDQLRILSQLDEETNARLAAQDDYDAGEMKLLAQENAEA 480 
WD40-rpts                                                                                      

Query      481 AMQRDLDKTRAFDVFAKKKEKEEEEQAQESVEDIKPEPRPEMKDLPQPKMFKGTLKGYQIKGMTWLANIYDQGISGILAD 560 
WD40-rpts                                                                                      

Query      561 EMGLGKTVQSIAFLCHIAEHYGVWGPFLVISPASTLHNWQQEMSRFVPDFKVVPYWGSPAERKILRQFWDQKHLHTRDAS 640 
WD40-rpts                                                                                      

Query      641 FHVVITSYQLVVSDYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLF 720 
WD40-rpts                                                                                      

Query      721 DSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSDKIEIMVYCPLTIRQKLLYRALKQKIR 800 
WD40-rpts                                                                                      

Query      801 IEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNHPELFERRDARSPFFMRCAEYTIPRLIHEEGLIHRMLPSRKHLLY 880 
WD40-rpts                                                                                      

Query      881 NRFNIFKSEYIQRSLFEDVNVNSCFGFTRLCDLSVGDMVEVTLNGLIDFLLHYRRVLEKYPLLAYRRFWWKKQPDSRYQL 960 
WD40-rpts                                                                                      

Query      961 LEPMLENKLALDYMPPNSVLKNFIFTAMTANESSVYAFGDYFTYNMQETIEHRVIRSKILKKKTSLIEEMEDVSKQKLEI 1040
WD40-rpts                                                                                      

Query     1041 ESVEVQTKSNAKSDVKVTTLLLLPEFPHRPRKPRKYVCEPLSMPRILYDLGQKVQAVHRYLYCDSRSAAWSQIRHNQCEN 1120
WD40-rpts                                                                                      

Query     1121 SQGRELVSSGLALCKPHGGWSSIVVPDKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYM 1200
WD40-rpts                                                                                (_____

Query     1201 RLDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLI 1280
WD40-rpts      ____________________WD 1_________________________)                              

Query     1281 CKGTIEERILQRAREKSEIQRMVISGGNFKPDTLKPKEVVSLLLDDEEIEMKYRQEAKLQSSSPIPAATQSERKRRHPQK 1360
WD40-rpts                                                                                      

Query     1361 DVNMGGTTIAATSATQNPDDDVPSCSSAAKRIKLETEEDFIDVGITSSASSVGTDSNHPTLSQETYVPGATCVQQTEIDS 1440
WD40-rpts                                                                                      

Query     1441 ENEALVVDGDSPTMLGQNESMNFLDDLSGISPMRRRHHPRGTRRGRPRGSTRRGGGHGSIPRVLTPTQAATPAVPATASQ 1520
WD40-rpts                                                                                      

Query     1521 AAAAGTGAAAGTSSPLPQQEVSGGGDNAGVPLHEEEYRTSPSGQSPGVSCKRGPGRPRSKTATPISRGTRGAPRARRPMG 1600
WD40-rpts                                                                                      

Query     1601 PLLVPLGRSPDDTPPSSSPATSRAPSPLSGSHGAVGPE 1638
WD40-rpts                                            

1 WD40-repeats found in QUERY=FBpp0083185 (Len=1638):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  9  1195-1250     2.86  232.75  0.04451       20.0%     32.73

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1195-1250   RKHRYMRLDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTAAD-TVIFYD

   WD40 Template    TGECLRTLSGHTS-----------------GVTSVSFSPDGKRLVSGSEDGTIKVWD