Input parameters:

  Query = FBpp0081634 (Len=730)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0081634, Len=730):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSHFTHASSSDLVNLNVGGQRFSTSRQTLTWIPDTFFTALLSGRISSLRDEHNAIFIDRDPTLFSIILNYLRTKDIDIKN 80  
WD40-rpts                                                                                      

Query       81 CEIRALRHEAEYYGITPLTKRLALCEDLNHSSCGDLLFYGFLAAPPMPSNEAVAATSVDESLPSTSASAIGSRPGSMVRV 160 
WD40-rpts                                                                                      

Query      161 PEPSRSSHSRNSSWDLRLGRTGSTGNGANPPAPMLHSRNPSIDFMRHSRNSSADLNKVFRNEVGLVFSPTQNSNWVDPLR 240 
WD40-rpts                                                                                      

Query      241 VQIIKAHQNWIAVAYAHFVTCYRVKDSNGWQQVFTSPHIDATIERIAINSKVNTSAAEPLPSKMVAISYGSQIRLWSIQE 320 
WD40-rpts                                                                                    (_

Query      321 GGQKTDVGTFNLNVRVEYLFFIGSQLVALSSSGKIGVWHAMTQHWQIQDLVPVLSFDSAGSFLLLGCNNGSIYYIDMQKF 400 
WD40-rpts      _________________WD 1_________________)                                         

Query      401 PLRIKDNDLLVTELYKDVTLDPITAISVYLTPKTSSISGNWIEIAYGTKSGAVRIIVQHPETAGHGPHLFETFFVHQSPV 480 
WD40-rpts                                                                                      

Query      481 TKVMLSEKYLVSVCSEYHHVRTWRLTRFRGMLSTQPGSTPEASFKIVSLEATDTSYSYAAGNDFGPYGDYDDMIFVQKVV 560 
WD40-rpts                                                                                      

Query      561 PETDQLYVRLASNGDRVCVIRSVDSSTISAFCVLECEVSSRFILTGHCNGAIQMWDLTTALALLSKDEPQQKINGGPDTN 640 
WD40-rpts                                                                                      

Query      641 ELLRLLDQCEISNSSCTTPCMSPCLSAMGNGSGMASSIARMKASNIALLNREPAMAMAVQAVQPPAQVQPALPEAVAPAA 720 
WD40-rpts                                                                                      

Query      721 AIPMADDNNE 730 
WD40-rpts                

1 WD40-repeats found in QUERY=FBpp0081634 (Len=730):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 12   319-359      3.40  255.26  0.02238       27.5%     28.45

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  319-359    QEGGQKTDVGTFNLNVRVEYLFFIGSQLVALSSSGKIGVWH

   WD40 Template    TGECLRTLSGHTS-GVTSVSFSPDGKRLVSGSEDGTIKVWD