Input parameters:

  Query = FBpp0080997 (Len=507)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0080997, Len=507):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSETSEDEQTQLQTSDEEEDLGSEEEQEDEDNNHKEGDSEAALSGEDDKGSEDDAAEEQKLTWKDLGLNEALCQACDELK 80  
WD40-rpts                                                                                      

Query       81 WKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKC 160 
WD40-rpts                      (__________________________________________WD 1_________________

Query      161 CVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVLPRERRTFL 240 
WD40-rpts      _________________________)                                                      

Query      241 FSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALML 320 
WD40-rpts                                                                                      

Query      321 RALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKA 400 
WD40-rpts                                                                                      

Query      401 ITLVSQYDIELYQRIEHLLGKQLTLYKCEEDEVMALQERVAEAQRTAKLELKDLEDTRGGHKRGGDTHDDSENFTGARKR 480 
WD40-rpts                                                                                      

Query      481 MKPMGGTGGGGRKSFGKKNWSKGKQKR 507 
WD40-rpts                                 

1 WD40-repeats found in QUERY=FBpp0080997 (Len=507):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    97-186      3.12  243.60  0.03199       20.0%     36.29

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   97-186    QGKDVIGLAETGSGKTGAFALPILHALLENPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIAT

   WD40 Template    TGECLRTLSGHTS-------------------GVTSVSFSPD--------------------GKRLVSGSED-----------GTIKVWD