Input parameters:

  Query = FBpp0080066 (Len=1710)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0080066, Len=1710):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSRREASLMAYVAAEEHLLNRYSPLEGDEIDTASEAPGDASDVAEDREYPTDLVASVTRSSRTGADLDPAVDSNLHVISD 80  
WD40-rpts                                                                                      

Query       81 DSDTHSFISSGSGFKGWPEEQPSSSFVPQNEPLIFGLRRQMMMTEETHQAPVWATCTPAKRSYSSHEVIEINDSPESVQD 160 
WD40-rpts                                                                                      

Query      161 PGIALSPGMLLTNGNVDQFEMLSHENDEAEHELQVAEEGEQCVIYEAVDGENMVVLGEEHCCEIIVATQGVACEQEFARA 240 
WD40-rpts                                                              (_______________________

Query      241 IMMAGNGTGALLGLLSEESDANECLNGTAYIEEVVEDMGVAEARLAAGNNVYLSDAALEQPLVHQDLVDDEAPEENENAT 320 
WD40-rpts      _____________________WD 1____________________________________________)          

Query      321 FLDDTPMEEERPDICQVYDHELEDHDDEECEDAVIQEEPAQPIDIVAFEGQEPLPNNPQRKLLREHSSPTEFPVSSSSMP 400 
WD40-rpts                                                                                      

Query      401 NASDHYDYEDELTGGRSPSKVAPLKRKYPPLMKNTLHGEAMDRRLASICQAQPQMSPAEKVSNWETAPREEWADVEDVEG 480 
WD40-rpts                                                                                      

Query      481 FEAAFKQYEAVTASLKQLNFAEFREALVRNMEKISREIMQTSDESTQELASSQSAERPVYRRYLHILPTEETIVLDDDDD 560 
WD40-rpts                                                                                      

Query      561 DCYEVVGMEKASVTTLIPEEELQDNQQPEEEEIVLPVVDDIKNTDSPNFEQRNLTKETSTADLERSALTQTAGSSAANLD 640 
WD40-rpts                                                                                      

Query      641 ASLSHAQPCPTAPAGLTDFMQANLSDRGPSEDQQLTKAVLDVMRQQVQTMQQQQQFMEQKMNQQPQMYHYEELPQAPQQM 720 
WD40-rpts                                                                                      

Query      721 QMEGNQGPYVKYPNEQQEFCNYLGLTELSTANAVATAMRELANSTIPRRSLRVRPQQQLDRMRSDVRGKRRERERDRQQD 800 
WD40-rpts                                                                                      

Query      801 KDKKIPLTTSSELSTDKEEPSPPQTSESVSRMAGDADVHFNSQMPAEHKRKLNHLYNSYFAEEEECSTKRSPKTTDFIAS 880 
WD40-rpts                                                                                      

Query      881 SKSLKDVERRPSLKGQEPQRHRSIIDGDGYQKHQIDNESEKGRVQSVEAAFTKIFEAAAPAQSKLLESMQQRLRQARETK 960 
WD40-rpts                                                                                      

Query      961 PSIYIIKATSNASPPNPSHSRQESHISPAPLNLIGGFGDVSAPHPSVISQPAKKSPTITSPDKETPAPLPVDTPKKSKHR 1040
WD40-rpts                                                                                      

Query     1041 KTHGATKPVAATPRRRTTMGASSLGNEARARDLVTRSTTHLNSKLLRSRKVSLLKSYALSDEMAQGRSKRMAGGAAQTTK 1120
WD40-rpts                                                                                      

Query     1121 KAPMPKAARTSLKKPADKSLPEQHRLEQQQLAPPNSPRKMKGVKETETDTTSAMKSSRLTKRTKRARAKSLPSNIERVTE 1200
WD40-rpts                                                                                      

Query     1201 PVAAVPNANVLRLADLAPEVPNTFAPTHSHLVNSTAKEAADKTFVHSPSVAQSPYAQPVLIYPPSPTTPPPNTEPHRPRQ 1280
WD40-rpts                                                                                      

Query     1281 QAGKVNPADLVLATPPGGLLRLSQGSATLANPLSAKHGQVLYMYYELEQLIVLQENCITFWKYSKVFNVLHQPRHNPSFD 1360
WD40-rpts                                                                                      

Query     1361 GARKSPSPKLPQTPSREPKDVEQELKMGPRWVYLGRVRRLTSEKEIFTPFGSRICVHNSTPVYLEMRSRPLDHHKREVKL 1440
WD40-rpts                                                                                      

Query     1441 TSLHVNVYYFCEEELRPRMHSVHLDAVNCEWPHVIYTTIADSRYFVMAWQQELVMGKSRSGICKYSLTPTLDTLASIREF 1520
WD40-rpts                                                                                      

Query     1521 KQLRHELRHIECLSEDRLIGYGQMRITVWDHRSGDTLMNYDLGRPLGRCLAATHYPSLDLDQSSMLVLYQLLKEPNKPSE 1600
WD40-rpts                                                                                      

Query     1601 VHVIACELSHATPSHRLLQVHRLPSPQFDDATEGVNTGDHLIIKSASNDEAWISAADPRQLTYLAPQINGAQRFYARHKS 1680
WD40-rpts                                                                                      

Query     1681 QVIEMSPQSLTVDSIANHMLKLAVQQTQSA 1710
WD40-rpts                                    

1 WD40-repeats found in QUERY=FBpp0080066 (Len=1710):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   217-310      3.29  250.44  0.02594       22.5%     11.22

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  217-310    GEEHCCEIIVATQGVACEQEFARAIMMAGNGTGALLGLLSEESDANECLNGTAYIEEVVEDMGVAEARLAAGNNVYLSDAALEQPLVHQDLVDD

   WD40 Template    TGECLRTLSGHTSGVT--------------------SVSFSPD-------GK--------------------RLVSGS---EDGTI----KVWD