Input parameters:

  Query = FBpp0079720 (Len=457)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0079720, Len=457):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPHAICILVVLGIYTLDGSGVLGGFMENTYPASVIEDAHLNTIQLLEKYKHPAETHQVTTDDKYILTLHRIARPGAKPVL 80  
WD40-rpts                                                                                      

Query       81 LVHGLEDTSSTWIVMGPESGLGYFLYANGYDVWMGNVRGNRYSKGHVKLNPNTDKSYWSFSWHEIGMYDLPAMIDGVLQK 160 
WD40-rpts                                                                                      

Query      161 TGYQKLSYFGHSQGTTSFFVMASSRPEYNAKIHLMSALAPVAFMKHMKAPLMGIARMGMNMFGDNFELFPHSEVFLNQCL 240 
WD40-rpts      (_______________________________________________WD 1____________________________

Query      241 SSAAMLKTCMRFYWQIVGKNREEQNMTMFPVVLGHLPGGCNIKQALHYLQMQKSDRFCQYDYESKENQRLYGRSTPPDYR 320 
WD40-rpts      ___________________)                                                            

Query      321 LERIKAPVALYYGSNDYLSAVEDVHRLAKVLPNVVENHLYRKWNHMDMIWGISARRSIQPRILQVMQYWETGGGGTKDGT 400 
WD40-rpts                                                                                      

Query      401 TGSPVEEDVPQLTTETPIEEGTTQGDEKIGNVQGNEEQGHAEETEQVQVTTSPTSEL 457 
WD40-rpts                                                               

1 WD40-repeats found in QUERY=FBpp0079720 (Len=457):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   161-260      2.79  229.85  0.04861       20.0%      5.62

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  161-260    TGYQKLSYFGHSQGTTSFFVMASSRPEYNAKIHLMSALAPVAFMKHMKAPLMGIARMGMNMFGDNFELFPHSEVFLNQCLSSAAMLKTCMRFYWQIVGKN

   WD40 Template    TGECLRTLSGHT----------SGV-------------TSVSFSPDGK-----------RLVSGSEDGTIK----------V----------------WD